[←][→] ath   AT1G47830 Gene
functional annotation
Function   SNARE-like superfamily protein  
GO BP
GO:0006897 [list] [network] endocytosis  (60 genes)  IEA  
GO:0016192 [list] [network] vesicle-mediated transport  (417 genes)  IBA  
GO:0015031 [list] [network] protein transport  (724 genes)  IEA  
GO CC
GO:0005905 [list] [network] clathrin-coated pit  (29 genes)  IEA  
GO:0005794 [list] [network] Golgi apparatus  (1430 genes)  ISM  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  IEA  
GO:0005634 [list] [network] nucleus  (10793 genes)  HDA  
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (19648 genes)  IBA  
GO MF
KEGG ath04144 [list] [network] Endocytosis (144 genes)
Protein NP_175219.1 
BLAST NP_175219.1 
Orthologous [Ortholog page] LOC4351755 (osa)  LOC7477670 (ppo)  LOC7479681 (ppo)  LOC11419257 (mtr)  LOC100260819 (vvi)  LOC100260827 (vvi)  LOC100281988 (zma)  LOC100500054 (gma)  LOC100500378 (gma)  LOC101261916 (sly)  LOC103650611 (zma)  LOC103839297 (bra)  LOC103843921 (bra) 
Subcellular
localization
wolf
mito 4,  cyto_mito 2,  chlo 2,  cyto 2,  nucl 1  (predict for NP_175219.1)
Subcellular
localization
TargetP
mito 8,  other 5  (predict for NP_175219.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 2
ath04144 Endocytosis 2
ath04626 Plant-pathogen interaction 2
Genes directly connected with AT1G47830 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.3 AT4G08520 SNARE-like superfamily protein [detail] 826411
7.8 AT1G57620 emp24/gp25L/p24 family/GOLD family protein [detail] 842138
7.6 AT1G09330 golgi apparatus membrane protein-like protein ECHIDNA protein [detail] 837454
7.4 RABG3A RAB GTPase homolog G3A [detail] 826558
7.2 AT1G69980 structural polyprotein [detail] 843335
7.1 AT2G31710 Vacuolar ATPase assembly integral membrane protein VMA21-like domain-containing protein [detail] 817727
6.8 CAM5 calmodulin 5 [detail] 817245
6.5 ARFC1 ADP-ribosylation factor C1 [detail] 821868
6.3 AT3G25580 Thioredoxin superfamily protein [detail] 822145
6.3 AT1G50670 OTU-like cysteine protease family protein [detail] 841489
6.2 AT1G62820 Calcium-binding EF-hand family protein [detail] 842581
6.1 AT1G47820 hypothetical protein [detail] 841198
5.9 AT3G50550 hypothetical protein [detail] 824219
5.7 AT3G50860 Clathrin adaptor complex small chain family protein [detail] 824250
4.9 AT2G44360 ecotropic viral integration site protein [detail] 819043
Coexpressed
gene list		 [Coexpressed gene list for AT1G47830]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
261733_at
261733_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
261733_at
261733_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
261733_at
261733_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 841199      
Refseq ID (protein) NP_175219.1 


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