[←][→] ath   AT1G48040 Gene
functional annotation
Function   Protein phosphatase 2C family protein  
GO BP
GO:0006470 [list] [network] protein dephosphorylation  (133 genes)  IEA  
GO CC
GO MF
GO:0004724 [list] [network] magnesium-dependent protein serine/threonine phosphatase activity  (70 genes)  IBA  
GO:0004722 [list] [network] protein serine/threonine phosphatase activity  (113 genes)  IBA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG
Protein NP_175238.2 
BLAST NP_175238.2 
Orthologous [Ortholog page] AT3G62260 (ath)  LOC4326717 (osa)  LOC4337723 (osa)  LOC7455402 (ppo)  LOC7460488 (ppo)  LOC7468124 (ppo)  LOC7471085 (ppo)  LOC11417065 (mtr)  LOC11417452 (mtr)  LOC25494138 (mtr)  LOC100240944 (vvi)  LOC100246961 (vvi)  LOC100273199 (zma)  LOC100279979 (zma)  LOC100775577 (gma)  LOC100781949 (gma)  LOC100785388 (gma)  LOC100798957 (gma)  LOC100819791 (gma)  LOC101261739 (sly)  LOC101264330 (sly)  LOC103842048 (bra)  LOC103871501 (bra) 
Subcellular
localization
wolf
nucl 4,  cyto 4,  chlo 1  (predict for NP_175238.2)
Subcellular
localization
TargetP
other 5  (predict for NP_175238.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 RNA transport 2
Genes directly connected with AT1G48040 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.1 AT1G74750 Pentatricopeptide repeat (PPR) superfamily protein [detail] 843814
6.8 G1 transmembrane protein G1P-related 1 [detail] 824342
6.4 ABCF1 ABC transporter family protein [detail] 836200
6.4 AT4G39820 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 830141
6.2 AT1G11390 Protein kinase superfamily protein [detail] 837681
6.1 TRO TRAUCO [detail] 841570
6.0 AT2G14850 transcriptional regulator of RNA polII, SAGA, subunit [detail] 815974
5.8 AT1G31220 Formyl transferase [detail] 840010
4.6 AT3G55640 Mitochondrial substrate carrier family protein [detail] 824730
Coexpressed
gene list		 [Coexpressed gene list for AT1G48040]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
260722_at
260722_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
260722_at
260722_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
260722_at
260722_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 841222      
Refseq ID (protein) NP_175238.2 


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