[←][→] ath   AT1G48580 Gene
functional annotation
Function   nuclear localized protein  
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
KEGG
Protein NP_001320641.1  NP_001320642.1  NP_175291.1 
BLAST NP_001320641.1  NP_001320642.1  NP_175291.1 
Orthologous [Ortholog page] LOC7486725 (ppo)  LOC9272173 (osa)  LOC11407596 (mtr)  LOC100256164 (vvi)  LOC100272709 (zma)  LOC100798949 (gma)  LOC101245148 (sly)  LOC103871461 (bra) 
Subcellular
localization
wolf
nucl 8,  cyto_nucl 5,  cyto 1  (predict for NP_001320641.1)
nucl 8,  cyto_nucl 5,  cyto 1  (predict for NP_001320642.1)
nucl 9  (predict for NP_175291.1)
Subcellular
localization
TargetP
other 6,  chlo 4  (predict for NP_001320641.1)
other 6,  chlo 4  (predict for NP_001320642.1)
other 6,  chlo 6  (predict for NP_175291.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03440 Homologous recombination 5
ath03030 DNA replication 3
ath03410 Base excision repair 2
ath03450 Non-homologous end-joining 2
Genes directly connected with AT1G48580 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
4.6 PAKRP1 phragmoplast-associated kinesin-related protein 1 [detail] 827054
4.4 AT1G77310 wound-responsive family protein [detail] 844067
4.4 FANCM DEAD/DEAH box RNA helicase family protein [detail] 840448
Coexpressed
gene list		 [Coexpressed gene list for AT1G48580]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
261302_at
261302_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
261302_at
261302_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
261302_at
261302_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 841279      
Refseq ID (protein) NP_001320641.1 
NP_001320642.1 
NP_175291.1 


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