[←][→] ath   AT1G49850 Gene
functional annotation
Function   RING/U-box superfamily protein  
GO BP
GO:0016567 [list] [network] protein ubiquitination  (624 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
GO:0016740 [list] [network] transferase activity  (3833 genes)  IEA  
KEGG
Protein NP_564556.1 
BLAST NP_564556.1 
Orthologous [Ortholog page] RNF12 (gma)  LOC4332001 (osa)  LOC25485358 (mtr)  LOC100216754 (zma)  LOC100249808 (vvi)  LOC100274167 (zma)  LOC100814695 (gma)  LOC101244425 (sly)  LOC103832912 (bra)  LOC103849551 (bra) 
Subcellular
localization
wolf
nucl 8,  mito 1,  plas 1,  extr 1,  mito_plas 1  (predict for NP_564556.1)
Subcellular
localization
TargetP
chlo 5,  mito 4  (predict for NP_564556.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04136 Autophagy - other 2
ath04016 MAPK signaling pathway - plant 2
Genes directly connected with AT1G49850 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.6 VPS28-2 Vacuolar protein sorting-associated protein VPS28 family protein [detail] 825842
5.5 AT2G19350 transmembrane protein (DUF872) [detail] 816452
4.9 MPK1 mitogen-activated protein kinase 1 [detail] 837559
4.8 AT1G58110 Basic-leucine zipper (bZIP) transcription factor family protein [detail] 842178
4.2 AT1G10690 cyclin-dependent kinase inhibitor [detail] 837612
Coexpressed
gene list		 [Coexpressed gene list for AT1G49850]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
259816_at
259816_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
259816_at
259816_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
259816_at
259816_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 841408      
Refseq ID (protein) NP_564556.1 


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