[←][→] ath   AT1G50250 Gene
functional annotation
Function   FTSH protease 1  
GO BP
GO:0010304 [list] [network] PSII associated light-harvesting complex II catabolic process  (8 genes)  IBA TAS  
GO:0010205 [list] [network] photoinhibition  (13 genes)  IBA  
GO:0010206 [list] [network] photosystem II repair  (14 genes)  IBA TAS  
GO:0010027 [list] [network] thylakoid membrane organization  (49 genes)  IBA  
GO:0006508 [list] [network] proteolysis  (901 genes)  IBA  
GO:0007275 [list] [network] multicellular organism development  (2714 genes)  IEA  
GO CC
GO:0031977 [list] [network] thylakoid lumen  (72 genes)  IDA  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (373 genes)  IBA IDA  
GO:0009534 [list] [network] chloroplast thylakoid  (474 genes)  IDA  
GO:0009941 [list] [network] chloroplast envelope  (666 genes)  IBA IDA  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  IDA ISM  
GO:0005634 [list] [network] nucleus  (10793 genes)  HDA  
GO MF
GO:0004176 [list] [network] ATP-dependent peptidase activity  (30 genes)  IBA ISS  
GO:0004222 [list] [network] metalloendopeptidase activity  (48 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2003 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_564563.1 
BLAST NP_564563.1 
Orthologous [Ortholog page] VAR1 (ath)  LOC4342113 (osa)  LOC7494681 (ppo)  LOC7496874 (ppo)  LOC25490290 (mtr)  LOC100037730 (sly)  LOC100250509 (vvi)  LOC100502422 (zma)  LOC100803824 (gma)  LOC100807408 (gma)  LOC103831194 (bra) 
Subcellular
localization
wolf
chlo 7,  plas 3  (predict for NP_564563.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_564563.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with FTSH1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
15.3 VAR1 FtsH extracellular protease family [detail] 834232
13.4 HCF173 high chlorophyll fluorescence phenotype 173 [detail] 838243
12.8 FTSH8 FTSH protease 8 [detail] 837154
12.1 VAR2 FtsH extracellular protease family [detail] 817646
10.5 AT3G24190 Protein kinase superfamily protein [detail] 822005
7.7 CCD1 carotenoid cleavage dioxygenase 1 [detail] 825527
7.0 AT1G52870 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein [detail] 841720
6.8 TIC55-II translocon at the inner envelope membrane of chloroplasts 55-II [detail] 817019
6.3 AT4G28740 LOW PSII ACCUMULATION-like protein [detail] 828995
5.5 HMA1 heavy metal atpase 1 [detail] 829881
Coexpressed
gene list		 [Coexpressed gene list for FTSH1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
262473_at
262473_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
262473_at
262473_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
262473_at
262473_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 841447      
Refseq ID (protein) NP_564563.1 


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