[←][→] ath   AT1G52380 Gene
functional annotation
Function   NUP50 (Nucleoporin 50 kDa) protein  
GO BP
GO:0051028 [list] [network] mRNA transport  (63 genes)  IEA  
GO:0046907 [list] [network] intracellular transport  (626 genes)  IEA  
GO:0015031 [list] [network] protein transport  (724 genes)  IEA  
GO CC
GO:0005643 [list] [network] nuclear pore  (52 genes)  IBA  
GO:0005654 [list] [network] nucleoplasm  (444 genes)  IEA  
GO:0005829 [list] [network] cytosol  (3506 genes)  IBA IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA IDA ISM  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IBA  
GO MF
GO:0008536 [list] [network] Ran GTPase binding  (14 genes)  IBA  
GO:0005096 [list] [network] GTPase activator activity  (59 genes)  IBA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_001322286.1  NP_001322287.1  NP_001322288.1  NP_564606.1 
BLAST NP_001322286.1  NP_001322287.1  NP_001322288.1  NP_564606.1 
Orthologous [Ortholog page] AT3G15970 (ath)  LOC4338497 (osa)  LOC7478386 (ppo)  LOC7486642 (ppo)  LOC25491384 (mtr)  LOC100265296 (vvi)  LOC100273971 (zma)  LOC100284246 (zma)  LOC100797325 (gma)  LOC100816316 (gma)  LOC101246934 (sly)  LOC101248860 (sly)  LOC103868506 (bra)  LOC103871212 (bra) 
Subcellular
localization
wolf
nucl 9,  plas 1  (predict for NP_001322286.1)
nucl 9,  plas 1  (predict for NP_001322287.1)
nucl 9,  plas 1  (predict for NP_001322288.1)
nucl 9,  plas 1  (predict for NP_564606.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001322286.1)
other 9  (predict for NP_001322287.1)
other 9  (predict for NP_001322288.1)
other 9  (predict for NP_564606.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 RNA transport 2
Genes directly connected with AT1G52380 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.5 AT3G15970 NUP50 (Nucleoporin 50 kDa) protein [detail] 820841
7.4 ABCF4 general control non-repressible 4 [detail] 824619
6.8 AT5G20600 ribosomal RNA processing-like protein [detail] 832182
Coexpressed
gene list		 [Coexpressed gene list for AT1G52380]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
259639_at
259639_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
259639_at
259639_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
259639_at
259639_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 841668      
Refseq ID (protein) NP_001322286.1 
NP_001322287.1 
NP_001322288.1 
NP_564606.1 


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