[←][→] ath   AT1G52730 Gene
functional annotation
Function   Transducin/WD40 repeat-like superfamily protein  
GO BP
GO CC
GO:0080008 [list] [network] Cul4-RING E3 ubiquitin ligase complex  (130 genes)  ISS  
GO:0005829 [list] [network] cytosol  (3506 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  HDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
KEGG ath03013 [list] [network] RNA transport (171 genes)
Protein NP_001322934.1  NP_175682.2  NP_849800.1 
BLAST NP_001322934.1  NP_175682.2  NP_849800.1 
Orthologous [Ortholog page] AT3G15610 (ath)  AT1G15470 (ath)  LOC4328675 (osa)  LOC4341446 (osa)  LOC7490969 (ppo)  LOC25486758 (mtr)  LOC100260049 (vvi)  LOC100261048 (vvi)  LOC100274502 (zma)  LOC100782712 (gma)  LOC100818422 (gma)  LOC101253366 (sly)  LOC103629787 (zma)  LOC103868481 (bra)  LOC103871195 (bra)  LOC103872342 (bra) 
Subcellular
localization
wolf
nucl 7,  chlo 1,  cyto 1,  pero 1,  chlo_mito 1,  cyto_pero 1  (predict for NP_001322934.1)
nucl 7,  cyto 2  (predict for NP_175682.2)
nucl 7,  cyto 2  (predict for NP_849800.1)
Subcellular
localization
TargetP
other 7  (predict for NP_001322934.1)
other 7  (predict for NP_175682.2)
other 7  (predict for NP_849800.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 RNA transport 5
ath03040 Spliceosome 4
ath03050 Proteasome 4
ath03015 mRNA surveillance pathway 3
Genes directly connected with AT1G52730 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.4 AT3G07170 Sterile alpha motif (SAM) domain-containing protein [detail] 819904
6.0 UCH2 Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 [detail] 842876
5.9 RPT6A regulatory particle triple-A ATPase 6A [detail] 832121
5.1 FIE Transducin/WD40 repeat-like superfamily protein [detail] 821622
Coexpressed
gene list		 [Coexpressed gene list for AT1G52730]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
262145_at
262145_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
262145_at
262145_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
262145_at
262145_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 841706      
Refseq ID (protein) NP_001322934.1 
NP_175682.2 
NP_849800.1 


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