[←][→] ath   AT1G53400 Gene
functional annotation
Function   Ubiquitin domain-containing protein  
GO BP
GO CC
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
KEGG
Protein NP_564630.1 
BLAST NP_564630.1 
Orthologous [Ortholog page] LOC4324429 (osa)  LOC4339404 (osa)  LOC4346799 (osa)  LOC11405273 (mtr)  LOC100247989 (vvi)  LOC100267634 (vvi)  LOC100285566 (zma)  LOC100286222 (zma)  LOC100306399 (gma)  LOC100812911 (gma)  LOC101247986 (sly)  LOC101257726 (sly)  LOC103868435 (bra)  LOC103871131 (bra) 
Subcellular
localization
wolf
mito 8,  nucl 1  (predict for NP_564630.1)
Subcellular
localization
TargetP
other 7  (predict for NP_564630.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04130 SNARE interactions in vesicular transport 3
Genes directly connected with AT1G53400 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.4 ATGP4 Ubiquitin family protein [detail] 828602
5.9 AT3G61260 Remorin family protein [detail] 825298
5.6 SYP51 syntaxin of plants 51 [detail] 838193
5.1 AT1G79660 ephrin-A3 protein [detail] 844305
4.9 CYSA cystatin A [detail] 818685
Coexpressed
gene list		 [Coexpressed gene list for AT1G53400]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
260589_at
260589_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
260589_at
260589_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
260589_at
260589_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 841776      
Refseq ID (protein) NP_564630.1 


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