| functional annotation |
| Function |
26S proteasome regulatory complex ATPase |
|
| GO BP |
|
GO:0030163 [list] [network] protein catabolic process
|
(603 genes)
|
IEA
|
 |
|
| GO CC |
|
GO:0009507 [list] [network] chloroplast
|
(5095 genes)
|
ISM
|
|
|
GO:0005634 [list] [network] nucleus
|
(10793 genes)
|
IEA
|
|
|
GO:0005737 [list] [network] cytoplasm
|
(14855 genes)
|
IEA
|
|
|
| GO MF |
|
GO:0005524 [list] [network] ATP binding
|
(2003 genes)
|
IEA
|
|
|
GO:0016787 [list] [network] hydrolase activity
|
(3024 genes)
|
IEA
|
|
|
| KEGG |
ath03050 [list] [network] Proteasome (60 genes) |
 |
| Protein |
NP_001185216.1
NP_001185217.1
NP_001321046.1
NP_175781.4
|
| BLAST |
NP_001185216.1
NP_001185217.1
NP_001321046.1
NP_175781.4
|
| Orthologous |
|
Subcellular
localization
wolf |
|
cyto 6,
chlo 1,
cysk 1
|
(predict for NP_001185216.1)
|
|
cyto 4,
cysk 1,
cysk_nucl 1,
cyto_E.R. 1,
cyto_plas 1
|
(predict for NP_001185217.1)
|
|
cyto 6,
chlo 1,
cysk 1
|
(predict for NP_001321046.1)
|
|
cyto 6,
chlo 1,
cysk 1
|
(predict for NP_175781.4)
|
|
Subcellular
localization
TargetP |
|
other 6,
scret 4
|
(predict for NP_001185216.1)
|
|
other 8
|
(predict for NP_001185217.1)
|
|
other 6,
scret 4
|
(predict for NP_001321046.1)
|
|
other 6,
scret 4
|
(predict for NP_175781.4)
|
|
| Gene coexpression |
Network*for
coexpressed
genes |
| KEGG* ID |
Title |
#genes |
Link to the KEGG* map
(Multiple genes) |
| ath03040 |
Spliceosome |
3 |
 |
Genes directly connected with AT1G53780 on the network
| coex z* |
Locus |
Function* |
Coexpression
detail |
Entrez Gene ID* |
| 8.5 |
AT4G36980 |
CLK4-associating serine/arginine-rich protein |
[detail] |
829852 |
| 8.2 |
AT1G70620 |
cyclin-like protein |
[detail] |
843399 |
| 8.1 |
SAC3B |
SAC3/GANP/Nin1/mts3/eIF-3 p25 family |
[detail] |
819803 |
| 6.3 |
AT1G48430 |
Dihydroxyacetone kinase |
[detail] |
841264 |
| 5.9 |
XPB1 |
DNA repair helicase XPB1-like protein |
[detail] |
834139 |
| 5.6 |
AT1G50970 |
Membrane trafficking VPS53 family protein |
[detail] |
841519 |
| 5.4 |
AT2G45380 |
myeloid leukemia factor |
[detail] |
819145 |
| 5.1 |
AT5G22700 |
LOW protein: F-box/FBD/LRR-like protein |
[detail] |
832335 |
| 4.7 |
AT5G01670 |
NAD(P)-linked oxidoreductase superfamily protein |
[detail] |
831701 |
| 4.6 |
AT4G25707 |
splicing factor 3A subunit |
[detail] |
28720182 |
| 3.9 |
AT5G41690 |
RNA-binding (RRM/RBD/RNP motifs) family protein |
[detail] |
834172 |
|
Coexpressed
gene list |
[Coexpressed gene list for AT1G53780]
|
| Gene expression |
| All samples |
[Expression pattern for all samples]
|
AT1G53780 Gene
