[←][→] ath   AT1G53910 Gene
functional annotation
Function   related to AP2 12  
GO BP
GO:0070483 [list] [network] detection of hypoxia  (3 genes)  IEP  
GO:2000280 [list] [network] regulation of root development  (79 genes)  IMP  
GO:0009873 [list] [network] ethylene-activated signaling pathway  (191 genes)  IEA  
GO:0001666 [list] [network] response to hypoxia  (263 genes)  IMP  
GO:0006355 [list] [network] regulation of transcription, DNA-templated  (1984 genes)  IEA  
GO CC
GO:0005886 [list] [network] plasma membrane  (3771 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IC IDA ISM  
GO MF
GO:0044212 [list] [network] transcription regulatory region DNA binding  (871 genes)  IPI  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1599 genes)  ISS TAS  
GO:0003677 [list] [network] DNA binding  (2280 genes)  TAS  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_001031185.1  NP_001077718.1  NP_175794.1 
BLAST NP_001031185.1  NP_001077718.1  NP_175794.1 
Orthologous [Ortholog page] JERF3 (sly)  JERF1 (sly)  EREB (gma)  RAP2.2 (ath)  LOC4330935 (osa)  LOC4340383 (osa)  LOC4347142 (osa)  LOC7483575 (ppo)  LOC11444630 (mtr)  LOC25488000 (mtr)  ERF3 (gma)  LOC100248027 (vvi)  LOC100279803 (zma)  LOC100282307 (zma)  LOC100283876 (zma)  LOC100810376 (gma)  ERF7 (gma)  ERF-E5 (sly)  LOC103832647 (bra)  LOC103842191 (bra)  LOC103859560 (bra)  LOC103870045 (bra) 
Subcellular
localization
wolf
nucl 7,  cyto_nucl 4,  cyto 1  (predict for NP_001031185.1)
nucl 6,  cyto_nucl 4,  plas 1,  cyto 1  (predict for NP_001077718.1)
nucl 7,  cyto_nucl 4,  cyto 1  (predict for NP_175794.1)
Subcellular
localization
TargetP
other 4,  chlo 4  (predict for NP_001031185.1)
other 4,  chlo 3  (predict for NP_001077718.1)
other 4,  chlo 4  (predict for NP_175794.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04016 MAPK signaling pathway - plant 2
ath01200 Carbon metabolism 2
ath00860 Porphyrin and chlorophyll metabolism 2
Genes directly connected with RAP2.12 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.0 RAP2.2 related to AP2 2 [detail] 820643
6.8 ABCI8 ATP binding cassette protein 1 [detail] 825814
5.6 AT3G43670 Copper amine oxidase family protein [detail] 823469
Coexpressed
gene list		 [Coexpressed gene list for RAP2.12]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
262197_at
262197_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
262197_at
262197_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
262197_at
262197_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 841829      
Refseq ID (protein) NP_001031185.1 
NP_001077718.1 
NP_175794.1 


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