[←][→] ath   AT1G54340 Gene
functional annotation
Function   isocitrate dehydrogenase  
GO BP
GO:0006102 [list] [network] isocitrate metabolic process  (12 genes)  IBA  
GO:0006739 [list] [network] NADP metabolic process  (41 genes)  IBA  
GO:0006099 [list] [network] tricarboxylic acid cycle  (54 genes)  IEA  
GO CC
GO:0005777 [list] [network] peroxisome  (325 genes)  IDA  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  IDA  
GO:0005739 [list] [network] mitochondrion  (4405 genes)  IBA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  ISM  
GO:0005634 [list] [network] nucleus  (10793 genes)  HDA  
GO MF
GO:0004450 [list] [network] isocitrate dehydrogenase (NADP+) activity  (3 genes)  IBA  
GO:0051287 [list] [network] NAD binding  (66 genes)  IEA  
GO:0000287 [list] [network] magnesium ion binding  (115 genes)  IEA  
KEGG ath00020 [list] [network] Citrate cycle (TCA cycle) (63 genes)
ath00480 [list] [network] Glutathione metabolism (102 genes)
ath01200 [list] [network] Carbon metabolism (273 genes)
ath01210 [list] [network] 2-Oxocarboxylic acid metabolism (74 genes)
ath01230 [list] [network] Biosynthesis of amino acids (251 genes)
ath04146 [list] [network] Peroxisome (87 genes)
Protein NP_001321996.1  NP_175836.1 
BLAST NP_001321996.1  NP_175836.1 
Orthologous [Ortholog page] IDH1 (gma)  AT5G14590 (ath)  cICDH (ath)  LOC4324176 (osa)  LOC4327213 (osa)  LOC4336353 (osa)  LOC4339674 (osa)  LOC7464575 (ppo)  LOC7468338 (ppo)  LOC7487863 (ppo)  LOC11419675 (mtr)  LOC11425956 (mtr)  LOC11445769 (mtr)  LOC100191657 (zma)  LOC100217128 (zma)  LOC100243260 (vvi)  LOC100249290 (vvi)  LOC100261578 (vvi)  LOC100272371 (zma)  LOC100274592 (zma)  LOC100786103 (gma)  IDH (gma)  LOC100816688 (gma)  LOC100819151 (gma)  LOC101248445 (sly)  LOC101255848 (sly)  LOC101268602 (sly)  LOC103830157 (bra)  LOC103831074 (bra)  LOC103849095 (bra)  LOC103852304 (bra)  LOC103856088 (bra) 
Subcellular
localization
wolf
cysk 6,  cyto 3  (predict for NP_001321996.1)
cysk 6,  pero 2,  cyto 1  (predict for NP_175836.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001321996.1)
other 9  (predict for NP_175836.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 4
ath04146 Peroxisome 4
ath00020 Citrate cycle (TCA cycle) 3
ath00480 Glutathione metabolism 3
ath01210 2-Oxocarboxylic acid metabolism 2
Genes directly connected with ICDH on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.8 AT4G13360 ATP-dependent caseinolytic (Clp) protease/crotonase family protein [detail] 826967
7.0 PMDH1 peroxisomal NAD-malate dehydrogenase 1 [detail] 816808
6.9 AT4G29490 Metallopeptidase M24 family protein [detail] 829070
5.6 AT1G47330 methyltransferase, putative (DUF21) [detail] 841136
4.1 AAE16 AMP-dependent synthetase and ligase family protein [detail] 821961
Coexpressed
gene list		 [Coexpressed gene list for ICDH]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
262962_at
262962_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
262962_at
262962_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
262962_at
262962_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 841875      
Refseq ID (protein) NP_001321996.1 
NP_175836.1 


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