[←][→] ath   AT1G54540 Gene
functional annotation
Function   Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family  
GO BP
GO CC
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO MF
KEGG
Protein NP_175856.1 
BLAST NP_175856.1 
Orthologous [Ortholog page] NHL25 (ath)  AT1G65690 (ath)  LOC4337404 (osa)  LOC7474070 (ppo)  LOC7484916 (ppo)  LOC7494378 (ppo)  LOC11426665 (mtr)  LOC25484544 (mtr)  LOC25489194 (mtr)  LOC100244374 (vvi)  LOC100249528 (vvi)  LOC100281231 (zma)  LOC100383182 (zma)  LOC100384448 (zma)  LOC100778798 (gma)  LOC100780820 (gma)  LOC100781699 (gma)  LOC100782663 (gma)  LOC100789322 (gma)  LOC100813932 (gma)  LOC101258038 (sly)  LOC101262768 (sly)  LOC103838730 (bra)  LOC103852291 (bra)  LOC103863700 (bra)  LOC103868314 (bra)  LOC104645573 (sly)  LOC112937907 (osa) 
Subcellular
localization
wolf
cyto 7,  nucl 1,  extr 1,  pero 1,  cysk_nucl 1,  nucl_plas 1  (predict for NP_175856.1)
Subcellular
localization
TargetP
other 7  (predict for NP_175856.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00073 Cutin, suberine and wax biosynthesis 2
Genes directly connected with AT1G54540 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
18.2 AT5G13900 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [detail] 831237
14.7 RWP1 HXXXD-type acyl-transferase family protein [detail] 834106
14.6 AT4G36610 alpha/beta-Hydrolases superfamily protein [detail] 829813
13.7 AT2G48130 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein [detail] 819425
12.3 AT2G21100 Disease resistance-responsive (dirigent-like protein) family protein [detail] 816645
8.0 ABCG16 ABC-2 type transporter family protein [detail] 824675
7.0 AT4G24130 DUF538 family protein (Protein of unknown function, DUF538) [detail] 828513
6.7 AT5G47530 Auxin-responsive family protein [detail] 834803
4.2 AT5G35110 hypothetical protein [detail] 28721214
Coexpressed
gene list		 [Coexpressed gene list for AT1G54540]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
263005_at
263005_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
263005_at
263005_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
263005_at
263005_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 841896      
Refseq ID (protein) NP_175856.1 


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