[←][→] ath   AT1G54770 Gene
functional annotation
Function   Fcf2 pre-rRNA processing protein  
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
KEGG
Protein NP_001319234.1  NP_175875.1 
BLAST NP_001319234.1  NP_175875.1 
Orthologous [Ortholog page] AT5G30495 (ath)  LOC4330616 (osa)  LOC11408252 (mtr)  LOC100240830 (vvi)  LOC100276488 (zma)  LOC100276831 (zma)  LOC100785966 (gma)  LOC100793132 (gma)  LOC100804228 (gma)  LOC100805828 (gma)  LOC101268685 (sly)  LOC103837310 (bra) 
Subcellular
localization
wolf
nucl 6,  cyto 1,  plas 1,  extr 1,  cysk 1,  cyto_pero 1,  cysk_plas 1,  cyto_E.R. 1  (predict for NP_001319234.1)
nucl 6,  cyto 1,  plas 1,  extr 1,  cysk 1,  cyto_pero 1,  cysk_plas 1,  cyto_E.R. 1  (predict for NP_175875.1)
Subcellular
localization
TargetP
other 7  (predict for NP_001319234.1)
other 7  (predict for NP_175875.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 4
ath03010 Ribosome 3
Genes directly connected with AT1G54770 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.8 HDT4 histone deacetylase-related / HD-like protein [detail] 817331
7.0 AT5G24840 tRNA (guanine-N-7) methyltransferase [detail] 832553
6.5 AT3G23620 Ribosomal RNA processing Brix domain protein [detail] 821942
5.7 AT1G55340 hypothetical protein (DUF1639) [detail] 841980
4.7 MDO1 telomere-capping, CST complex subunit [detail] 842079
Coexpressed
gene list		 [Coexpressed gene list for AT1G54770]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
264239_at
264239_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
264239_at
264239_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
264239_at
264239_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 841918      
Refseq ID (protein) NP_001319234.1 
NP_175875.1 


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