[←][→] ath   AT1G55150 Gene
functional annotation
Function   DEA(D/H)-box RNA helicase family protein  
GO BP
GO:0000184 [list] [network] nuclear-transcribed mRNA catabolic process, nonsense-mediated decay  (19 genes)  IEA  
GO:0006364 [list] [network] rRNA processing  (276 genes)  IEA  
GO CC
GO:1990904 [list] [network] ribonucleoprotein complex  (690 genes)  IBA  
GO:0005829 [list] [network] cytosol  (3506 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA ISM  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IBA  
GO MF
GO:0003724 [list] [network] RNA helicase activity  (75 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1790 genes)  IBA  
GO:0005524 [list] [network] ATP binding  (2003 genes)  IEA  
KEGG ath03040 [list] [network] Spliceosome (192 genes)
Protein NP_001322402.1  NP_175911.1 
BLAST NP_001322402.1  NP_175911.1 
Orthologous [Ortholog page] LOC542146 (zma)  ER68 (sly)  AT5G63120 (ath)  LOC7458051 (ppo)  LOC9268869 (osa)  LOC9271802 (osa)  LOC11429899 (mtr)  LOC25493727 (mtr)  LOC100248020 (vvi)  LOC100260348 (vvi)  LOC100274281 (zma)  LOC100777610 (gma)  LOC100781619 (gma)  LOC100790464 (gma)  LOC100817092 (gma)  LOC101265421 (sly)  LOC103832610 (bra)  LOC103837456 (bra) 
Subcellular
localization
wolf
nucl 5,  cyto 3,  cysk_nucl 3  (predict for NP_001322402.1)
cyto 6,  nucl 2,  chlo 1,  nucl_plas 1  (predict for NP_175911.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001322402.1)
other 5,  mito 4  (predict for NP_175911.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
Genes directly connected with RH20 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.5 MAP1A methionine aminopeptidase 1A [detail] 819132
6.4 AT3G04600 Nucleotidylyl transferase superfamily protein [detail] 819617
6.3 RIN1 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 832293
5.2 AT2G03667 Asparagine synthase family protein [detail] 5007865
Coexpressed
gene list		 [Coexpressed gene list for RH20]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
256152_at
256152_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
256152_at
256152_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
256152_at
256152_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 841958      
Refseq ID (protein) NP_001322402.1 
NP_175911.1 


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