[←][→] ath   AT1G55930 Gene
functional annotation
Function   CBS domain-containing protein / transporter associated domain-containing protein  
GO BP
GO CC
GO:0031969 [list] [network] chloroplast membrane  (259 genes)  IEA  
GO:0009941 [list] [network] chloroplast envelope  (666 genes)  IDA  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  ISM  
GO:0009536 [list] [network] plastid  (5519 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  HDA  
GO MF
GO:0050660 [list] [network] flavin adenine dinucleotide binding  (147 genes)  IEA  
KEGG
Protein NP_001321525.1  NP_175989.2 
BLAST NP_001321525.1  NP_175989.2 
Orthologous [Ortholog page] AT3G13070 (ath)  LOC4333362 (osa)  LOC7485088 (ppo)  LOC11436662 (mtr)  LOC100260506 (vvi)  LOC100778907 (gma)  LOC101250908 (sly)  LOC103643663 (zma)  LOC103859495 (bra)  LOC103870197 (bra) 
Subcellular
localization
wolf
plas 4,  E.R. 3,  vacu 1,  cyto 1,  mito 1  (predict for NP_001321525.1)
plas 6,  E.R. 2,  cyto 1,  mito 1,  extr 1  (predict for NP_175989.2)
Subcellular
localization
TargetP
chlo 9  (predict for NP_001321525.1)
chlo 9  (predict for NP_175989.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 3
ath03018 RNA degradation 2
ath03030 DNA replication 2
ath03410 Base excision repair 2
ath03420 Nucleotide excision repair 2
Genes directly connected with AT1G55930 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.7 AT5G50310 Galactose oxidase/kelch repeat superfamily protein [detail] 835096
5.6 POLGAMMA2 polymerase gamma 2 [detail] 841506
5.5 SDN2 small RNA degrading nuclease 2 [detail] 830437
5.3 ADK1 dual specificity kinase 1 [detail] 839368
4.6 AT1G64180 intracellular protein transport protein USO1-like protein [detail] 842722
Coexpressed
gene list		 [Coexpressed gene list for AT1G55930]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
260598_at
260598_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
260598_at
260598_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
260598_at
260598_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 842044      
Refseq ID (protein) NP_001321525.1 
NP_175989.2 


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