ATTED-II : GeneID search result

[←][→] ath AT1G56610 Gene

functional annotation

Function

Protein with RNI-like/FBD-like domain

GO BP

GO:0016567 [list] [network] protein ubiquitination

(624 genes)

IEA

GO CC

GO:0016021 [list] [network] integral component of membrane	(4803 genes)	IEA
GO:0009507 [list] [network] chloroplast	(5095 genes)	ISM
GO:0005634 [list] [network] nucleus	(10793 genes)	ISM

GO MF

KEGG

Protein

NP_001031201.1 NP_001185253.1 NP_176054.2

BLAST

NP_001031201.1 NP_001185253.1 NP_176054.2

Orthologous

Subcellular
localization
wolf

cyto 6, nucl 1, chlo 1, plas 1, cysk 1, E.R._vacu 1, cysk_plas 1	(predict for NP_001031201.1)
mito 3, cyto 2, cyto_mito 2, nucl 1, pero 1, cyto_plas 1	(predict for NP_001185253.1)
chlo 7, nucl 1, vacu 1, cyto_nucl 1, cysk_nucl 1, golg_plas 1	(predict for NP_176054.2)

Subcellular
localization
TargetP

other 7	(predict for NP_001031201.1)
other 7, mito 3	(predict for NP_001185253.1)
scret 9	(predict for NP_176054.2)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AT1G56610 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
5.0	ALF4	aberrant root formation protein	[detail]	830970
4.9	GolS2	galactinol synthase 2	[detail]	842114
4.2	AT3G22470	Pentatricopeptide repeat (PPR) superfamily protein	[detail]	821818

Coexpressed
gene list

[Coexpressed gene list for AT1G56610]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

245678_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

245678_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

245678_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	842116
Refseq ID (protein)	NP_001031201.1
	NP_001185253.1
	NP_176054.2

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