ATTED-II : GeneID search result

[←][→] ath AT1G60460 Gene

functional annotation

Function

hypothetical protein

GO BP

GO:0048314 [list] [network] embryo sac morphogenesis	(3 genes)	IMP
GO:0042138 [list] [network] meiotic DNA double-strand break formation	(9 genes)	IBA IMP
GO:0048235 [list] [network] pollen sperm cell differentiation	(35 genes)	IMP
GO:0007131 [list] [network] reciprocal meiotic recombination	(49 genes)	IBA IMP

GO CC

GO:0000793 [list] [network] condensed chromosome	(60 genes)	IBA IMP
GO:0009507 [list] [network] chloroplast	(5095 genes)	ISM
GO:0005634 [list] [network] nucleus	(10793 genes)	IDA ISM
GO:0005737 [list] [network] cytoplasm	(14855 genes)	IDA

GO MF

GO:0003918 [list] [network] DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity	(9 genes)	TAS
GO:0030674 [list] [network] protein binding, bridging	(30 genes)	IBA IPI
GO:0005515 [list] [network] protein binding	(4605 genes)	IPI

KEGG

Protein

NP_001031210.1 NP_001031211.1 NP_001320533.1 NP_001320534.1 NP_176249.2

BLAST

NP_001031210.1 NP_001031211.1 NP_001320533.1 NP_001320534.1 NP_176249.2

Orthologous

[Ortholog page] LOC4342019 (osa) LOC7492394 (ppo) LOC11413525 (mtr) LOC100267199 (vvi) LOC100790078 (gma) LOC101251595 (sly) LOC103626426 (zma) LOC103829835 (bra)

Subcellular
localization
wolf

chlo 5, nucl 1, cysk_nucl 1, cyto 1, mito 1, plas 1, extr 1, vacu 1, mito_plas 1, cyto_plas 1	(predict for NP_001031210.1)
chlo 6, nucl 1, cyto 1, plas 1, extr 1, vacu 1, cysk_nucl 1, cyto_plas 1	(predict for NP_001031211.1)
cyto 4, nucl 2, E.R. 2, cyto_pero 2	(predict for NP_001320533.1)
nucl 6, plas 1, mito_plas 1, chlo 1, vacu 1, E.R. 1, E.R._vacu 1	(predict for NP_001320534.1)
chlo 6, nucl 1, cysk_nucl 1, cyto 1, plas 1, extr 1, vacu 1, cyto_plas 1	(predict for NP_176249.2)

Subcellular
localization
TargetP

mito 6	(predict for NP_001031210.1)
scret 6	(predict for NP_001031211.1)
scret 9	(predict for NP_001320533.1)
other 6	(predict for NP_001320534.1)
scret 6	(predict for NP_176249.2)

Gene coexpression

Network^*for
coexpressed
genes

Coexpressed
gene list

[Coexpressed gene list for AT1G60460]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

264964_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

264964_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

264964_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	842341
Refseq ID (protein)	NP_001031210.1
	NP_001031211.1
	NP_001320533.1
	NP_001320534.1
	NP_176249.2

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