[←][→] ath   AT1G66620 Gene
functional annotation
Function   Protein with RING/U-box and TRAF-like domain  
GO BP
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (436 genes)  IEA  
GO:0016567 [list] [network] protein ubiquitination  (624 genes)  IEA  
GO:0007275 [list] [network] multicellular organism development  (2714 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IEA  
GO MF
GO:0008270 [list] [network] zinc ion binding  (554 genes)  IEA  
GO:0016740 [list] [network] transferase activity  (3833 genes)  IEA  
KEGG ath04120 [list] [network] Ubiquitin mediated proteolysis (143 genes)
Protein NP_176835.1 
BLAST NP_176835.1 
Orthologous [Ortholog page] AT5G37870 (ath)  AT5G37890 (ath)  AT5G37900 (ath)  AT5G37910 (ath)  AT5G37930 (ath)  AT5G62800 (ath)  AT1G66610 (ath)  AT1G66630 (ath)  AT1G66650 (ath)  AT1G66660 (ath)  LOC4340862 (osa)  LOC7493536 (ppo)  LOC7494532 (ppo)  LOC11418747 (mtr)  LOC11425847 (mtr)  LOC11436875 (mtr)  LOC11437704 (mtr)  LOC11445862 (mtr)  LOC25483069 (mtr)  LOC25483070 (mtr)  LOC25493350 (mtr)  LOC25494869 (mtr)  LOC25499082 (mtr)  LOC100260463 (vvi)  LOC100273809 (zma)  LOC100778869 (gma)  LOC100797881 (gma)  LOC101256260 (sly)  LOC101256849 (sly)  LOC101262084 (sly)  LOC101262896 (sly)  LOC102662420 (gma)  LOC103829298 (bra)  LOC103831113 (bra)  LOC103831115 (bra)  LOC103841498 (bra)  LOC103850097 (bra)  LOC103857391 (bra)  LOC103860069 (bra)  LOC103863762 (bra)  LOC103864155 (bra)  LOC103864598 (bra)  LOC103867898 (bra)  LOC103872071 (bra)  LOC104646203 (sly)  LOC109119263 (sly)  LOC109119702 (sly) 
Subcellular
localization
wolf
nucl 5,  mito 3,  chlo 1,  cyto_mito 1  (predict for NP_176835.1)
Subcellular
localization
TargetP
other 6  (predict for NP_176835.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 9
ath03420 Nucleotide excision repair 6
ath03430 Mismatch repair 6
ath03440 Homologous recombination 5
ath03410 Base excision repair 2
Genes directly connected with AT1G66620 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.9 AT5G54970 hypothetical protein [detail] 835588
7.4 POLA3 DNA primase POLA3 [detail] 834193
7.3 AT3G12170 Chaperone DnaJ-domain superfamily protein [detail] 820394
Coexpressed
gene list		 [Coexpressed gene list for AT1G66620]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
256409_at
256409_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
256409_at
256409_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
256409_at
256409_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 842980      
Refseq ID (protein) NP_176835.1 


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