| functional annotation |
| Function |
3-ketoacyl-CoA synthase 6 |
|
| GO BP |
|
GO:0010025 [list] [network] wax biosynthetic process
|
(23 genes)
|
IMP
|
 |
|
GO:0042335 [list] [network] cuticle development
|
(36 genes)
|
IDA
|
|
|
GO:0000038 [list] [network] very long-chain fatty acid metabolic process
|
(38 genes)
|
IDA
|
|
|
GO:0006633 [list] [network] fatty acid biosynthetic process
|
(150 genes)
|
IEA
|
|
|
GO:0009826 [list] [network] unidimensional cell growth
|
(279 genes)
|
IMP
|
|
|
GO:0009409 [list] [network] response to cold
|
(411 genes)
|
IEP
|
|
|
GO:0009416 [list] [network] response to light stimulus
|
(700 genes)
|
IEP
|
|
|
| GO CC |
|
GO:0005789 [list] [network] endoplasmic reticulum membrane
|
(466 genes)
|
IEA
|
|
|
GO:0005783 [list] [network] endoplasmic reticulum
|
(877 genes)
|
IDA
|
|
|
GO:0005739 [list] [network] mitochondrion
|
(4405 genes)
|
HDA
|
|
|
GO:0016021 [list] [network] integral component of membrane
|
(4803 genes)
|
IEA
|
|
|
GO:0005737 [list] [network] cytoplasm
|
(14855 genes)
|
ISM
|
|
|
| GO MF |
|
GO:0102336 [list] [network] 3-oxo-arachidoyl-CoA synthase activity
|
(21 genes)
|
IEA
|
|
|
GO:0102337 [list] [network] 3-oxo-cerotoyl-CoA synthase activity
|
(21 genes)
|
IEA
|
|
|
GO:0102338 [list] [network] 3-oxo-lignoceronyl-CoA synthase activity
|
(21 genes)
|
IEA
|
|
|
GO:0102756 [list] [network] very-long-chain 3-ketoacyl-CoA synthase activity
|
(21 genes)
|
IEA
|
|
|
| KEGG |
ath00062 [list] [network] Fatty acid elongation (35 genes) |
 |
| Protein |
NP_177020.1
NP_849861.1
|
| BLAST |
NP_177020.1
NP_849861.1
|
| Orthologous |
[Ortholog page]
KCS5 (ath)
LOC4332090 (osa)
LOC7489345 (ppo)
LOC11408155 (mtr)
LOC25485501 (mtr)
LOC100191595 (zma)
LOC100252441 (vvi)
LOC100266928 (vvi)
LOC100811728 (gma)
LOC100815887 (gma)
LOC100816997 (gma)
CER6 (sly)
LOC101252875 (sly)
LOC101257332 (sly)
LOC103639429 (zma)
LOC103830968 (bra)
LOC103840573 (bra)
|
Subcellular
localization
wolf |
|
plas 6,
E.R. 1,
nucl 1,
cyto 1,
vacu 1,
golg 1,
cyto_nucl 1
|
(predict for NP_177020.1)
|
|
plas 4,
E.R. 3,
golg_plas 3
|
(predict for NP_849861.1)
|
|
Subcellular
localization
TargetP |
|
other 6,
scret 3
|
(predict for NP_177020.1)
|
|
other 6,
scret 3
|
(predict for NP_849861.1)
|
|
| Gene coexpression |
Network*for
coexpressed
genes |
| KEGG* ID |
Title |
#genes |
Link to the KEGG* map
(Multiple genes) |
| ath00062 |
Fatty acid elongation |
4 |
 |
Genes directly connected with KCS6 on the network
| coex z* |
Locus |
Function* |
Coexpression
detail |
Entrez Gene ID* |
| 16.2 |
ABCG12 |
ABC-2 type transporter family protein |
[detail] |
841575 |
| 13.2 |
ABCG11 |
white-brown complex-like protein |
[detail] |
838363 |
| 12.6 |
ABCB2 |
P-glycoprotein 2 |
[detail] |
828702 |
| 12.0 |
RD22 |
BURP domain-containing protein |
[detail] |
832636 |
| 11.0 |
CER2 |
HXXXD-type acyl-transferase family protein |
[detail] |
828553 |
| 11.0 |
KCS3 |
3-ketoacyl-CoA synthase 3 |
[detail] |
837286 |
| 9.2 |
AT1G09310 |
plant/protein (Protein of unknown function, DUF538) |
[detail] |
837452 |
| 8.5 |
DCF |
HXXXD-type acyl-transferase family protein |
[detail] |
824033 |
| 6.1 |
ABCG19 |
white-brown complex homolog 19 |
[detail] |
824679 |
| 5.5 |
RLP27 |
receptor like protein 27 |
[detail] |
817868 |
| 5.2 |
KCS12 |
3-ketoacyl-CoA synthase 12 |
[detail] |
817412 |
|
Coexpressed
gene list |
[Coexpressed gene list for KCS6]
|
| Gene expression |
| All samples |
[Expression pattern for all samples]
|
AtGenExpress*
(Development) |
260267_at
X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.
|
AtGenExpress*
(Stress) |
260267_at
X axis is samples (pdf file), and Y axis is log2-expression.
|
AtGenExpress*
(Hormone) |
260267_at
X axis is samples (xls file), and Y axis is log-expression.
|
AT1G68530 Gene
