ATTED-II : GeneID search result

[←][→] ath AT1G68930 Gene

functional annotation

Function

pentatricopeptide (PPR) repeat-containing protein

GO BP

GO:0009451 [list] [network] RNA modification

(403 genes)

IBA

GO CC

GO:0005739 [list] [network] mitochondrion

(4405 genes)

ISM

GO MF

GO:0008270 [list] [network] zinc ion binding

(554 genes)

IEA

KEGG

Protein

NP_001319351.1 NP_001320691.1

BLAST

NP_001319351.1 NP_001320691.1

Orthologous

[Ortholog page] LOC4328019 (osa) LOC7489396 (ppo) LOC11423689 (mtr) LOC25501453 (mtr) LOC100242829 (vvi) LOC100502275 (zma) LOC100807213 (gma) LOC101254486 (sly) LOC103831305 (bra)

Subcellular
localization
wolf

chlo 8, mito 2	(predict for NP_001319351.1)
chlo 9	(predict for NP_001320691.1)

Subcellular
localization
TargetP

mito 5	(predict for NP_001319351.1)
other 7, mito 3	(predict for NP_001320691.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AT1G68930 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
10.1	AT3G18020	Pentatricopeptide repeat (PPR) superfamily protein	[detail]	821326
9.9	AT3G02330	Pentatricopeptide repeat (PPR) superfamily protein	[detail]	821115
9.5	AT3G58590	Pentatricopeptide repeat (PPR) superfamily protein	[detail]	825028
8.2	AT3G09040	Pentatricopeptide repeat (PPR) superfamily protein	[detail]	820057
6.1	AT1G71490	Tetratricopeptide repeat (TPR)-like superfamily protein	[detail]	843490
6.0	EMB3111	Tetratricopeptide repeat (TPR)-like superfamily protein	[detail]	814667

Coexpressed
gene list

[Coexpressed gene list for AT1G68930]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

259698_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

259698_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

259698_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	843226
Refseq ID (protein)	NP_001319351.1
Refseq ID (protein)	NP_001320691.1

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