[←][→] ath   AT1G69670 Gene
functional annotation
Function   cullin 3B  
GO BP
GO:0009960 [list] [network] endosperm development  (34 genes)  IGI  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (436 genes)  IEA TAS  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (547 genes)  IGI  
GO:0016567 [list] [network] protein ubiquitination  (624 genes)  IEA  
GO CC
GO:0019005 [list] [network] SCF ubiquitin ligase complex  (68 genes)  IPI  
GO:0000151 [list] [network] ubiquitin ligase complex  (277 genes)  TAS  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0031625 [list] [network] ubiquitin protein ligase binding  (54 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath04120 [list] [network] Ubiquitin mediated proteolysis (143 genes)
Protein NP_001319357.1  NP_177125.3 
BLAST NP_001319357.1  NP_177125.3 
Orthologous [Ortholog page] CUL3 (ath)  LOC4330720 (osa)  LOC4337175 (osa)  LOC4344771 (osa)  LOC11410449 (mtr)  LOC11411434 (mtr)  LOC100254227 (vvi)  LOC100265464 (vvi)  LOC100384196 (zma)  LOC100782239 (gma)  LOC100794520 (gma)  LOC100795098 (gma)  LOC100798198 (gma)  LOC101248999 (sly)  LOC101254652 (sly)  LOC103627724 (zma)  LOC103835615 (bra)  LOC103840654 (bra) 
Subcellular
localization
wolf
cyto 6,  nucl 2,  chlo 1  (predict for NP_001319357.1)
cyto 6,  nucl 2,  chlo 1  (predict for NP_177125.3)
Subcellular
localization
TargetP
other 7,  mito 4  (predict for NP_001319357.1)
other 7,  mito 4  (predict for NP_177125.3)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 3
Genes directly connected with CUL3B on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
10.5 CUL3 cullin 3 [detail] 839226
8.0 AT2G39260 regulator of nonsense transcripts UPF2 [detail] 818511
7.2 AT2G27285 nuclear speckle splicing regulatory-like protein (DUF2040) [detail] 817271
6.6 AT5G52550 stress response NST1-like protein [detail] 835332
6.1 AT5G40520 DNA double-strand break repair protein [detail] 834050
5.8 GC6 golgin Putative 6 [detail] 822375
Coexpressed
gene list		 [Coexpressed gene list for CUL3B]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
260416_at
260416_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
260416_at
260416_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
260416_at
260416_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 843303      
Refseq ID (protein) NP_001319357.1 
NP_177125.3 


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