[←][→] ath   AT1G72090 Gene
functional annotation
Function   Methylthiotransferase  
GO BP
GO:0035600 [list] [network] tRNA methylthiolation  (1 genes)  IBA  
GO CC
GO:0005783 [list] [network] endoplasmic reticulum  (877 genes)  IBA IDA  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO MF
GO:0035598 [list] [network] N6-threonylcarbomyladenosine methylthiotransferase activity  (1 genes)  IBA  
GO:0051539 [list] [network] 4 iron, 4 sulfur cluster binding  (81 genes)  IEA  
KEGG
Protein NP_565035.1 
BLAST NP_565035.1 
Orthologous [Ortholog page] LOC4335891 (osa)  LOC25491785 (mtr)  LOC100191823 (zma)  LOC100258899 (vvi)  LOC100798865 (gma)  LOC101256832 (sly)  LOC103831720 (bra) 
Subcellular
localization
wolf
cyto 5,  nucl 2,  chlo 1,  plas 1,  vacu 1,  E.R. 1,  E.R._vacu 1,  E.R._plas 1  (predict for NP_565035.1)
Subcellular
localization
TargetP
other 7,  chlo 3  (predict for NP_565035.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 2
ath03040 Spliceosome 2
ath03020 RNA polymerase 2
Genes directly connected with AT1G72090 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.6 AT1G77550 tubulin-tyrosine ligase [detail] 844091
6.6 HMG high mobility group [detail] 822505
6.4 UBA 2 ubiquitin activating enzyme 2 [detail] 830534
5.9 LDL1 LSD1-like 1 [detail] 842582
5.6 AT4G32970 BRISC/BRCA1-A complex protein [detail] 829434
5.3 AT3G06660 PAPA-1-like family protein / zinc finger (HIT type) family protein [detail] 819851
Coexpressed
gene list		 [Coexpressed gene list for AT1G72090]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
256343_at
256343_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
256343_at
256343_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
256343_at
256343_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 843540      
Refseq ID (protein) NP_565035.1 


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