[←][→] ath   AT1G72175 Gene
functional annotation
Function   E3 ubiquitin-protein ligase RNF170-like protein (DUF 1232)  
GO BP
GO CC
GO:0005739 [list] [network] mitochondrion  (4405 genes)  ISM  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0016874 [list] [network] ligase activity  (232 genes)  IEA  
KEGG
Protein NP_001323299.1  NP_565037.1 
BLAST NP_001323299.1  NP_565037.1 
Orthologous [Ortholog page] LOC4334720 (osa)  LOC11414140 (mtr)  LOC11418365 (mtr)  LOC100193852 (zma)  LOC100247708 (vvi)  LOC100306204 (gma)  LOC101246687 (sly)  LOC103829327 (bra) 
Subcellular
localization
wolf
plas 5,  mito 3,  nucl_plas 3,  E.R._plas 3  (predict for NP_001323299.1)
E.R. 4,  plas 2,  vacu 2,  cyto_E.R. 2  (predict for NP_565037.1)
Subcellular
localization
TargetP
mito 7  (predict for NP_001323299.1)
other 7  (predict for NP_565037.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 4
Genes directly connected with AT1G72175 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.0 AT2G03690 coenzyme Q biosynthesis Coq4 family protein / ubiquinone biosynthesis Coq4 family protein [detail] 814897
5.6 AT4G17420 Tryptophan RNA-binding attenuator protein-like protein [detail] 827453
4.9 AT4G40042 Microsomal signal peptidase 12 kDa subunit (SPC12) [detail] 830166
Coexpressed
gene list		 [Coexpressed gene list for AT1G72175]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
259800_at
259800_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
259800_at
259800_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
259800_at
259800_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 843549      
Refseq ID (protein) NP_001323299.1 
NP_565037.1 


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