ATTED-II : GeneID search result

[←][→] ath AT1G72440 Gene

functional annotation

Function

CCAAT-binding factor

GO BP

GO:0010197 [list] [network] polar nucleus fusion	(31 genes)	IMP
GO:0009553 [list] [network] embryo sac development	(146 genes)	IMP

GO CC

GO:0005654 [list] [network] nucleoplasm	(444 genes)	IDA
GO:0005730 [list] [network] nucleolus	(477 genes)	IDA
GO:0005634 [list] [network] nucleus	(10793 genes)	IBA ISM

GO MF

KEGG

Protein

NP_177388.2

BLAST

NP_177388.2

Orthologous

[Ortholog page] LOC4346414 (osa) LOC11409943 (mtr) LOC11415122 (mtr) LOC100249732 (vvi) LOC100802669 (gma) LOC100814566 (gma) LOC101248558 (sly) LOC103632850 (zma) LOC103831752 (bra)

Subcellular
localization
wolf

nucl 7, cyto 1, mito 1, pero 1, cyto_E.R. 1, cyto_plas 1

(predict for NP_177388.2)

Subcellular
localization
TargetP

scret 5, chlo 3

(predict for NP_177388.2)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03008	Ribosome biogenesis in eukaryotes	4

Genes directly connected with EDA25 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
14.6	AT3G16840	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[detail]	820937
13.6	OLI2	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein	[detail]	835690
13.6	AT2G18220	Noc2p family	[detail]	816337

Coexpressed
gene list

[Coexpressed gene list for EDA25]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

260425_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

260425_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

260425_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	843576
Refseq ID (protein)	NP_177388.2

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