functional annotation |
Function |
DNA-directed RNA polymerase |
|
GO BP |
|
GO CC |
|
GO MF |
GO:0001054 [list] [network] RNA polymerase I activity
|
(20 genes)
|
IBA
|
|
GO:0003899 [list] [network] DNA-directed 5'-3' RNA polymerase activity
|
(59 genes)
|
IBA
|
|
|
KEGG |
|
|
Protein |
NP_001320477.1
NP_565115.1
NP_974148.1
|
BLAST |
NP_001320477.1
NP_565115.1
NP_974148.1
|
Orthologous |
[Ortholog page]
LOC4340256 (osa)
LOC4352407 (osa)
LOC11436168 (mtr)
LOC100264366 (vvi)
LOC100276818 (zma)
LOC100527229 (gma)
LOC100816727 (gma)
LOC101248579 (sly)
LOC103852969 (bra)
|
Subcellular localization wolf |
cyto 5,
nucl 1,
plas 1,
E.R. 1,
nucl_plas 1,
E.R._plas 1
|
(predict for NP_001320477.1)
|
cyto 4,
E.R. 1,
E.R._vacu 1,
plas 1,
vacu 1,
nucl_plas 1
|
(predict for NP_565115.1)
|
cyto 4,
E.R. 1,
E.R._vacu 1,
plas 1,
vacu 1,
nucl_plas 1
|
(predict for NP_974148.1)
|
|
Subcellular localization TargetP |
other 6,
scret 3
|
(predict for NP_001320477.1)
|
other 6,
scret 3
|
(predict for NP_565115.1)
|
other 6,
scret 3
|
(predict for NP_974148.1)
|
|
Gene coexpression |
Network*for coexpressed genes |
KEGG* ID |
Title |
#genes |
Link to the KEGG* map (Multiple genes) |
ath03020 |
RNA polymerase |
3 |
|
ath03008 |
Ribosome biogenesis in eukaryotes |
2 |
|
Genes directly connected with AT1G75670 on the network
coex z* |
Locus |
Function* |
Coexpression detail |
Entrez Gene ID* |
11.5 |
AT3G13230 |
RNA-binding KH domain-containing protein |
[detail] |
820521 |
10.7 |
IMP4 |
Ribosomal RNA processing Brix domain protein |
[detail] |
842682 |
10.7 |
RID2 |
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
[detail] |
835833 |
10.0 |
AT3G15080 |
Polynucleotidyl transferase, ribonuclease H-like superfamily protein |
[detail] |
820738 |
9.5 |
AT5G15750 |
Alpha-L RNA-binding motif/Ribosomal protein S4 family protein |
[detail] |
831431 |
9.2 |
AT3G25940 |
TFIIB zinc-binding protein |
[detail] |
822191 |
9.2 |
AT2G44510 |
CDK inhibitor P21 binding protein |
[detail] |
819058 |
7.5 |
MFDX2 |
MITOCHONDRIAL FERREDOXIN 2 |
[detail] |
827856 |
7.4 |
AT2G01640 |
ribosome biogenesis protein |
[detail] |
814693 |
7.4 |
NRPB5 |
Eukaryotic rpb5 RNA polymerase subunit family protein |
[detail] |
821801 |
6.7 |
AT5G11010 |
Pre-mRNA cleavage complex II protein family |
[detail] |
830968 |
6.7 |
RPAC43 |
RNA polymerase I subunit 43 |
[detail] |
842356 |
|
Coexpressed gene list |
[Coexpressed gene list for AT1G75670]
|
Gene expression |
All samples |
[Expression pattern for all samples]
|
AtGenExpress* (Development) |
262953_at
X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.
|
AtGenExpress* (Stress) |
262953_at
X axis is samples (pdf file), and Y axis is log2-expression.
|
AtGenExpress* (Hormone) |
262953_at
X axis is samples (xls file), and Y axis is log-expression.
|