[←][→] ath   AT1G75850 Gene
functional annotation
Function   VPS35 homolog B  
GO BP
GO:0042147 [list] [network] retrograde transport, endosome to Golgi  (24 genes)  IBA  
GO:0006886 [list] [network] intracellular protein transport  (516 genes)  IBA  
GO CC
GO:0030904 [list] [network] retromer complex  (9 genes)  IBA  
GO:0005623 [list] [network] cell  (76 genes)  ISS  
GO:0005770 [list] [network] late endosome  (91 genes)  IBA  
GO:0005829 [list] [network] cytosol  (3506 genes)  ISS  
GO:0005622 [list] [network] intracellular  (21658 genes)  ISS  
GO MF
KEGG ath04144 [list] [network] Endocytosis (144 genes)
Protein NP_001321274.1  NP_177713.3 
BLAST NP_001321274.1  NP_177713.3 
Orthologous [Ortholog page] VPS35A (ath)  VPS35C (ath)  LOC4334459 (osa)  LOC7496914 (ppo)  LOC11413082 (mtr)  LOC11423814 (mtr)  LOC100243826 (vvi)  LOC100248964 (vvi)  LOC100279276 (zma)  LOC100285267 (zma)  LOC100775573 (gma)  LOC100778365 (gma)  LOC100809289 (gma)  LOC100811902 (gma)  LOC101243768 (sly)  LOC101249253 (sly)  LOC101265987 (sly)  LOC103832036 (bra)  LOC103841052 (bra)  LOC103845916 (bra) 
Subcellular
localization
wolf
cyto 3,  chlo 2,  E.R. 2,  cyto_nucl 2  (predict for NP_001321274.1)
nucl 2,  cyto 2,  cyto_nucl 2,  chlo 1,  plas 1,  E.R. 1,  cyto_pero 1,  E.R._plas 1  (predict for NP_177713.3)
Subcellular
localization
TargetP
other 6,  scret 3  (predict for NP_001321274.1)
other 9  (predict for NP_177713.3)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04136 Autophagy - other 3
Genes directly connected with VPS35B on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.1 AT1G69340 appr-1-p processing enzyme family protein [detail] 843266
7.0 AT4G24100 Protein kinase superfamily protein [detail] 828510
6.1 AT2G37840 Protein kinase superfamily protein [detail] 818361
6.1 AT3G53930 Protein kinase superfamily protein [detail] 824560
5.7 BRCC36A Mov34/MPN/PAD-1 family protein [detail] 844361
5.5 CNGC6 cyclic nucleotide-gated channel 6 [detail] 816931
Coexpressed
gene list		 [Coexpressed gene list for VPS35B]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
262695_at
262695_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
262695_at
262695_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
262695_at
262695_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 843918      
Refseq ID (protein) NP_001321274.1 
NP_177713.3 


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