[←][→] ath   AT1G78610 Gene
functional annotation
Function   mechanosensitive channel of small conductance-like 6  
GO BP
GO:0006820 [list] [network] anion transport  (285 genes)  IBA  
GO:0055085 [list] [network] transmembrane transport  (778 genes)  IEA  
GO CC
GO:0005774 [list] [network] vacuolar membrane  (624 genes)  IDA  
GO:0009506 [list] [network] plasmodesma  (962 genes)  IDA  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  IBA IDA  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0008381 [list] [network] mechanosensitive ion channel activity  (10 genes)  IBA  
KEGG
Protein NP_177982.1 
BLAST NP_177982.1 
Orthologous [Ortholog page] AT2G17010 (ath)  MSL5 (ath)  MSL4 (ath)  LOC4330259 (osa)  LOC4336655 (osa)  LOC7453665 (ppo)  LOC11438231 (mtr)  LOC100262278 (vvi)  LOC100304377 (zma)  LOC100789882 (gma)  LOC101251284 (sly)  LOC101263769 (sly)  LOC102665658 (gma)  LOC103641987 (zma)  LOC103646080 (zma)  LOC103653893 (zma)  LOC103654560 (zma)  LOC103832338 (bra)  LOC103832666 (bra)  LOC103846000 (bra)  LOC103859590 (bra)  LOC104645221 (sly)  LOC104878206 (vvi) 
Subcellular
localization
wolf
plas 6,  E.R. 2,  nucl 1  (predict for NP_177982.1)
Subcellular
localization
TargetP
other 8  (predict for NP_177982.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00062 Fatty acid elongation 4
ath01040 Biosynthesis of unsaturated fatty acids 3
ath01212 Fatty acid metabolism 3
Genes directly connected with MSL6 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
4.8 APC1 Mitochondrial substrate carrier family protein [detail] 836303
4.3 AT1G19970 ER lumen protein retaining receptor family protein [detail] 838586
4.3 AGP12 arabinogalactan protein 12 [detail] 820554
Coexpressed
gene list		 [Coexpressed gene list for MSL6]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
263127_at
263127_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
263127_at
263127_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
263127_at
263127_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 844197      
Refseq ID (protein) NP_177982.1 


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