[←][→] ath   AT1G79500 Gene
functional annotation
Function   Aldolase-type TIM barrel family protein  
GO BP
GO:0010306 [list] [network] rhamnogalacturonan II biosynthetic process  (7 genes)  TAS  
GO:0046364 [list] [network] monosaccharide biosynthetic process  (49 genes)  IDA  
GO:0009860 [list] [network] pollen tube growth  (129 genes)  IMP  
GO:0048868 [list] [network] pollen tube development  (186 genes)  IMP  
GO CC
GO:0005829 [list] [network] cytosol  (3506 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IEA ISM  
GO MF
GO:0008676 [list] [network] 3-deoxy-8-phosphooctulonate synthase activity  (2 genes)  IDA  
KEGG
Protein NP_001319413.1  NP_001319414.1  NP_001319415.1  NP_178068.1 
BLAST NP_001319413.1  NP_001319414.1  NP_001319415.1  NP_178068.1 
Orthologous [Ortholog page] kdsA (sly)  ATKDSA2 (ath)  LOC4351779 (osa)  LOC7468748 (ppo)  LOC7492498 (ppo)  LOC11437185 (mtr)  LOC100191165 (zma)  LOC100255394 (vvi)  LOC100809120 (gma)  LOC100810842 (gma)  LOC103830480 (bra)  LOC103853194 (bra) 
Subcellular
localization
wolf
cyto 7,  chlo 1,  vacu 1,  pero 1,  golg 1  (predict for NP_001319413.1)
cyto 7,  chlo 1,  vacu 1,  pero 1,  golg 1  (predict for NP_001319414.1)
cyto 7,  chlo 1,  vacu 1,  pero 1,  golg 1  (predict for NP_001319415.1)
cyto 7,  chlo 1,  vacu 1,  pero 1,  golg 1  (predict for NP_178068.1)
Subcellular
localization
TargetP
scret 6  (predict for NP_001319413.1)
scret 6  (predict for NP_001319414.1)
scret 6  (predict for NP_001319415.1)
scret 6  (predict for NP_178068.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00260 Glycine, serine and threonine metabolism 2
ath01200 Carbon metabolism 2
ath01230 Biosynthesis of amino acids 2
Genes directly connected with AtkdsA1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.7 ATKDSA2 Aldolase superfamily protein [detail] 838203
8.2 GS1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein [detail] 835849
6.0 AT3G20790 NAD(P)-binding Rossmann-fold superfamily protein [detail] 821627
5.9 AT3G09800 SNARE-like superfamily protein [detail] 820138
5.7 AT3G07200 RING/U-box superfamily protein [detail] 819908
5.7 AT5G49555 FAD/NAD(P)-binding oxidoreductase family protein [detail] 835017
5.0 AT3G13030 hAT transposon superfamily protein [detail] 820489
4.7 GA2 Terpenoid cyclases/Protein prenyltransferases superfamily protein [detail] 844284
Coexpressed
gene list		 [Coexpressed gene list for AtkdsA1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
262920_at
262920_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
262920_at
262920_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
262920_at
262920_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 844288      
Refseq ID (protein) NP_001319413.1 
NP_001319414.1 
NP_001319415.1 
NP_178068.1 


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