ATTED-II : GeneID search result

[←][→] ath AT1G79830 Gene

functional annotation

Function

golgin Putative 5

GO BP

GO CC

GO:0005794 [list] [network] Golgi apparatus	(1430 genes)	IDA IEA
GO:0005576 [list] [network] extracellular region	(3363 genes)	ISM
GO:0005634 [list] [network] nucleus	(10793 genes)	IDA
GO:0005737 [list] [network] cytoplasm	(14855 genes)	IDA ISM

GO MF

GO:0005515 [list] [network] protein binding

(4605 genes)

IPI

KEGG

Protein

NP_001117622.1 NP_001185441.1 NP_001185442.1 NP_001321438.1 NP_178101.3

BLAST

NP_001117622.1 NP_001185441.1 NP_001185442.1 NP_001321438.1 NP_178101.3

Orthologous

[Ortholog page] LOC4339592 (osa) LOC7478402 (ppo) LOC11425783 (mtr) LOC100250341 (vvi) LOC100785153 (gma) LOC100807759 (gma) LOC101249736 (sly) LOC103630722 (zma) LOC103635328 (zma) LOC103830401 (bra)

Subcellular
localization
wolf

nucl 6, chlo 1, cyto 1, mito 1, cysk 1, golg 1, chlo_mito 1	(predict for NP_001117622.1)
nucl 6, cyto 1, mito 1, cysk 1, golg 1, cyto_pero 1, cyto_E.R. 1, cyto_plas 1	(predict for NP_001185441.1)
nucl 6, chlo 1, cyto 1, mito 1, cysk 1, golg 1, chlo_mito 1	(predict for NP_001185442.1)
nucl 7, chlo 1, mito 1, cysk 1, golg 1, chlo_mito 1	(predict for NP_001321438.1)
nucl 6, chlo 1, cyto 1, mito 1, cysk 1, golg 1, chlo_mito 1	(predict for NP_178101.3)

Subcellular
localization
TargetP

other 6	(predict for NP_001117622.1)
other 6	(predict for NP_001185441.1)
other 6	(predict for NP_001185442.1)
other 6	(predict for NP_001321438.1)
other 6	(predict for NP_178101.3)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with GC5 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
11.6	ATGRIP	Golgi-localized GRIP domain-containing protein	[detail]	836733
8.3	AT5G16210	HEAT repeat-containing protein	[detail]	831480
8.3	GC1	golgin Putative 1	[detail]	816514
7.1	AT4G16150	calmodulin-binding transcription activator 5	[detail]	827305

Coexpressed
gene list

[Coexpressed gene list for GC5]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

260162_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

260162_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

260162_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	844322
Refseq ID (protein)	NP_001117622.1
	NP_001185441.1
	NP_001185442.1
	NP_001321438.1
	NP_178101.3

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