[←][→] ath   AT1G80060 Gene
functional annotation
Function   Ubiquitin-like superfamily protein  
GO BP
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (172 genes)  IEA  
GO CC
GO:0005689 [list] [network] U12-type spliceosomal complex  (18 genes)  IEA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
KEGG
Protein NP_001319424.1  NP_001320236.1  NP_001320237.1  NP_001320238.1  NP_178123.1 
BLAST NP_001319424.1  NP_001320236.1  NP_001320237.1  NP_001320238.1  NP_178123.1 
Orthologous [Ortholog page] AT4G32270 (ath)  AT5G25340 (ath)  LOC4328555 (osa)  LOC7471597 (ppo)  LOC11428818 (mtr)  LOC11432857 (mtr)  LOC100250997 (vvi)  LOC100262712 (vvi)  LOC100304237 (zma)  LOC100781177 (gma)  LOC100790105 (gma)  LOC100819176 (gma)  LOC100820296 (gma)  LOC101243721 (sly)  LOC101244976 (sly)  LOC101262527 (sly)  LOC103834567 (bra)  LOC103851195 (bra)  LOC103854759 (bra)  LOC103862111 (bra)  LOC103874396 (bra)  LOC104880664 (vvi) 
Subcellular
localization
wolf
nucl 6,  cyto 3  (predict for NP_001319424.1)
nucl 6,  cyto 3  (predict for NP_001320236.1)
nucl 6,  cyto 3  (predict for NP_001320237.1)
nucl 6,  cyto 2,  extr 1  (predict for NP_001320238.1)
nucl 6,  cyto 3  (predict for NP_178123.1)
Subcellular
localization
TargetP
other 4,  mito 3  (predict for NP_001319424.1)
other 4,  mito 3  (predict for NP_001320236.1)
other 4,  mito 3  (predict for NP_001320237.1)
other 8  (predict for NP_001320238.1)
other 4,  mito 3  (predict for NP_178123.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
Genes directly connected with AT1G80060 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
4.8 ARV1 ARV1 family protein [detail] 839569
4.6 AT4G01020 helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-like protein [detail] 826439
4.5 AT4G39550 Galactose oxidase/kelch repeat superfamily protein [detail] 830109
Coexpressed
gene list		 [Coexpressed gene list for AT1G80060]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
262067_at
262067_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
262067_at
262067_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
262067_at
262067_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 844346      
Refseq ID (protein) NP_001319424.1 
NP_001320236.1 
NP_001320237.1 
NP_001320238.1 
NP_178123.1 


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