ATTED-II : GeneID search result

[←][→] ath AT1G80740 Gene

functional annotation

Function

chromomethylase 1

GO BP

GO:0010424 [list] [network] DNA methylation on cytosine within a CG sequence	(10 genes)	IBA
GO:0010216 [list] [network] maintenance of DNA methylation	(20 genes)	IBA
GO:0009294 [list] [network] DNA mediated transformation	(26 genes)	IMP
GO:0006325 [list] [network] chromatin organization	(338 genes)	IEA

GO CC

GO:0005634 [list] [network] nucleus

(10793 genes)

IBA ISM

GO MF

GO:0003886 [list] [network] DNA (cytosine-5-)-methyltransferase activity	(9 genes)	IBA
GO:0003682 [list] [network] chromatin binding	(126 genes)	IEA
GO:0003677 [list] [network] DNA binding	(2280 genes)	IBA

KEGG

ath00270 [list] [network] Cysteine and methionine metabolism (121 genes)

Protein

NP_565245.1

BLAST

NP_565245.1

Orthologous

[Ortholog page] LOC541827 (zma) LOC542060 (zma) CMT2 (ath) CMT3 (ath) LOC4332128 (osa) LOC4338140 (osa) LOC4347954 (osa) LOC7483264 (ppo) LOC11416506 (mtr) LOC25491491 (mtr) LOC25496175 (mtr) LOC25496870 (mtr) LOC25496971 (mtr) LOC25497416 (mtr) LOC25501554 (mtr) LOC100249359 (vvi) LOC100252100 (vvi) LOC100255190 (vvi) LOC100258788 (vvi) LOC100798061 (gma) LOC100799480 (gma) LOC100817688 (gma) LOC100818307 (gma) CMT4 (sly) CMT3 (sly) CMT2 (sly) LOC103857074 (bra) LOC103871899 (bra) LOC103873920 (bra)

Subcellular
localization
wolf

chlo 6, cyto 2, nucl 1, cysk 1, cysk_nucl 1

(predict for NP_565245.1)

Subcellular
localization
TargetP

other 6

(predict for NP_565245.1)

Gene coexpression

Network^*for
coexpressed
genes

Coexpressed
gene list

[Coexpressed gene list for CMT1]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

261903_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

261903_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

261903_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	844413
Refseq ID (protein)	NP_565245.1

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