[←][→] ath   AT1G80790 Gene
functional annotation
Function   XH/XS domain-containing protein  
GO BP
GO:0080188 [list] [network] RNA-directed DNA methylation  (20 genes)  IGI  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
KEGG
Protein NP_001321039.1  NP_001321040.1  NP_178194.1 
BLAST NP_001321039.1  NP_001321040.1  NP_178194.1 
Orthologous [Ortholog page] FDM2 (ath)  FDM1 (ath)  LOC4329065 (osa)  LOC7478299 (ppo)  LOC11425283 (mtr)  LOC11440090 (mtr)  LOC25494210 (mtr)  LOC100252420 (vvi)  LOC100257549 (vvi)  LOC100382110 (zma)  LOC100790829 (gma)  LOC100798940 (gma)  LOC101244470 (sly)  LOC103830457 (bra)  LOC103842874 (bra)  LOC103872390 (bra) 
Subcellular
localization
wolf
nucl 7,  cyto_nucl 4,  cyto 1  (predict for NP_001321039.1)
nucl 8,  cyto_nucl 5,  cyto 1  (predict for NP_001321040.1)
nucl 8,  cyto_nucl 5,  cyto 1  (predict for NP_178194.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001321039.1)
other 9  (predict for NP_001321040.1)
other 9  (predict for NP_178194.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with FDM5 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.4 AT4G26630 DEK domain-containing chromatin associated protein [detail] 828770
8.9 AT5G55660 DEK domain-containing chromatin associated protein [detail] 835660
8.5 LINC3 little nuclei3 [detail] 843210
5.9 SGS3 XS domain-containing protein / XS zinc finger domain-containing protein-like protein [detail] 832422
4.7 AT1G67590 Remorin family protein [detail] 843080
Coexpressed
gene list		 [Coexpressed gene list for FDM5]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
261891_at
261891_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
261891_at
261891_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
261891_at
261891_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 844418      
Refseq ID (protein) NP_001321039.1 
NP_001321040.1 
NP_178194.1 


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