ATTED-II : GeneID search result

[←][→] ath AT1G01120 Gene

functional annotation

Function

3-ketoacyl-CoA synthase 1

GO BP

GO:0030497 [list] [network] fatty acid elongation	(15 genes)	IDA
GO:0010025 [list] [network] wax biosynthetic process	(23 genes)	IDA IMP
GO:0042335 [list] [network] cuticle development	(36 genes)	IMP
GO:0000038 [list] [network] very long-chain fatty acid metabolic process	(38 genes)	IDA
GO:0006633 [list] [network] fatty acid biosynthetic process	(150 genes)	IEA
GO:0009409 [list] [network] response to cold	(411 genes)	IEP
GO:0009416 [list] [network] response to light stimulus	(700 genes)	IEP

GO CC

GO:0022626 [list] [network] cytosolic ribosome	(317 genes)	IDA
GO:0005789 [list] [network] endoplasmic reticulum membrane	(466 genes)	IEA
GO:0005783 [list] [network] endoplasmic reticulum	(877 genes)	IDA
GO:0016021 [list] [network] integral component of membrane	(4803 genes)	IEA
GO:0016020 [list] [network] membrane	(7839 genes)	ISS
GO:0005737 [list] [network] cytoplasm	(14855 genes)	ISM

GO MF

GO:0009922 [list] [network] fatty acid elongase activity	(10 genes)	IDA
GO:0102336 [list] [network] 3-oxo-arachidoyl-CoA synthase activity	(21 genes)	IEA
GO:0102337 [list] [network] 3-oxo-cerotoyl-CoA synthase activity	(21 genes)	IEA
GO:0102338 [list] [network] 3-oxo-lignoceronyl-CoA synthase activity	(21 genes)	IEA
GO:0102756 [list] [network] very-long-chain 3-ketoacyl-CoA synthase activity	(21 genes)	IEA

KEGG

ath00062 [list] [network] Fatty acid elongation (35 genes)

ath04626 [list] [network] Plant-pathogen interaction (170 genes)

Protein

NP_171620.2

BLAST

NP_171620.2

Orthologous

[Ortholog page] LOC542018 (zma) KCS11 (ath) KCS20 (ath) KCS2 (ath) LOC4328676 (osa) LOC4339684 (osa) LOC4341445 (osa) LOC4350817 (osa) LOC7459007 (ppo) LOC7471569 (ppo) LOC11435384 (mtr) LOC11441612 (mtr) LOC25482932 (mtr) LOC25484467 (mtr) LOC25486760 (mtr) LOC100247295 (vvi) LOC100259490 (vvi) LOC100263066 (vvi) LOC100266256 (vvi) LOC100285225 (zma) LOC100782027 (gma) LOC100783247 (gma) LOC100785983 (gma) LOC100790099 (gma) LOC100790385 (gma) LOC100794273 (gma) LOC100797395 (gma) LOC100801121 (gma) LOC100817884 (gma) LOC101244691 (sly) LOC101246151 (sly) LOC101258036 (sly) LOC101262858 (sly) LOC101268230 (sly) LOC101268257 (sly) LOC103630762 (zma) LOC103655094 (zma) LOC103827956 (bra) LOC103843773 (bra) LOC103844277 (bra) LOC103844626 (bra) LOC103847245 (bra) LOC103848834 (bra)

Subcellular
localization
wolf

plas 6, vacu 2, extr 1, golg 1

(predict for NP_171620.2)

Subcellular
localization
TargetP

other 8

(predict for NP_171620.2)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00062	Fatty acid elongation	5
ath04626	Plant-pathogen interaction	3
ath00073	Cutin, suberine and wax biosynthesis	2

Genes directly connected with KCS1 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
12.4	HHP1	heptahelical transmembrane protein1	[detail]	832149
11.1	CYP86A2	cytochrome P450, family 86, subfamily A, polypeptide 2	[detail]	828019
9.5	KCS10	3-ketoacyl-CoA synthase 10	[detail]	817165
9.3	KCS20	3-ketoacyl-CoA synthase 20	[detail]	834398
7.8	AT2G41170	F-box family protein	[detail]	818716
6.9	CRK42	cysteine-rich RLK (RECEPTOR-like protein kinase) 42	[detail]	834036
6.7	AT3G54200	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[detail]	824587

Coexpressed
gene list

[Coexpressed gene list for KCS1]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

261570_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

261570_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

261570_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	839395
Refseq ID (protein)	NP_171620.2

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