[←][→] ath   AT1G02460 Gene
functional annotation
Function   Pectin lyase-like superfamily protein  
GO BP
GO:0071555 [list] [network] cell wall organization  (538 genes)  IEA  
GO:0005975 [list] [network] carbohydrate metabolic process  (995 genes)  IEA  
GO CC
GO:0005576 [list] [network] extracellular region  (3363 genes)  IEA ISM  
GO MF
GO:0004650 [list] [network] polygalacturonase activity  (52 genes)  IEA  
GO:0016829 [list] [network] lyase activity  (412 genes)  IEA  
KEGG
Protein NP_563654.1 
BLAST NP_563654.1 
Orthologous [Ortholog page] PG7 (gma)  AT4G01890 (ath)  AT1G48100 (ath)  AT1G56710 (ath)  LOC4326721 (osa)  LOC4338287 (osa)  LOC7455403 (ppo)  LOC7460486 (ppo)  LOC7465225 (ppo)  LOC7498233 (ppo)  LOC11410191 (mtr)  LOC11412440 (mtr)  LOC11435306 (mtr)  LOC25493429 (mtr)  LOC100194076 (zma)  LOC100253880 (vvi)  LOC100263206 (vvi)  LOC100264928 (vvi)  LOC100284066 (zma)  LOC100776338 (gma)  LOC100778836 (gma)  LOC100785528 (gma)  LOC100792135 (gma)  LOC100792285 (gma)  LOC100797770 (gma)  LOC100809979 (gma)  LOC100820085 (gma)  LOC101259291 (sly)  LOC101261316 (sly)  LOC101266864 (sly)  LOC103635045 (zma)  LOC103838677 (bra)  LOC103843750 (bra)  LOC103844581 (bra)  LOC103858798 (bra)  LOC103871496 (bra) 
Subcellular
localization
wolf
chlo 3,  extr 2,  nucl 1,  cyto 1,  E.R. 1,  cyto_nucl 1,  chlo_mito 1,  cyto_E.R. 1  (predict for NP_563654.1)
Subcellular
localization
TargetP
mito 2  (predict for NP_563654.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT1G02460 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.2 AT4G23500 Pectin lyase-like superfamily protein [detail] 828450
5.5 AT3G61490 Pectin lyase-like superfamily protein [detail] 825322
4.7 NUDT10 nudix hydrolase homolog 10 [detail] 828648
Coexpressed
gene list		 [Coexpressed gene list for AT1G02460]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
260903_at
260903_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
260903_at
260903_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
260903_at
260903_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 839443      
Refseq ID (protein) NP_563654.1 


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