[←][→] ath   AT1G03140 Gene
functional annotation
Function   splicing factor Prp18 family protein  
GO BP
GO:0000350 [list] [network] generation of catalytic spliceosome for second transesterification step  (3 genes)  IBA  
GO:0071048 [list] [network] nuclear retention of unspliced pre-mRNA at the site of transcription  (3 genes)  IBA  
GO:0000380 [list] [network] alternative mRNA splicing, via spliceosome  (11 genes)  IMP  
GO CC
GO:0071021 [list] [network] U2-type post-spliceosomal complex  (2 genes)  IBA  
GO:0005682 [list] [network] U5 snRNP  (15 genes)  IBA  
GO:0046540 [list] [network] U4/U6 x U5 tri-snRNP complex  (27 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0000386 [list] [network] second spliceosomal transesterification activity  (7 genes)  IBA  
KEGG ath03040 [list] [network] Spliceosome (192 genes)
Protein NP_563676.1 
BLAST NP_563676.1 
Orthologous [Ortholog page] AT1G54590 (ath)  LOC4343671 (osa)  LOC7464681 (ppo)  LOC25499124 (mtr)  LOC100216989 (zma)  LOC100247737 (vvi)  LOC100282048 (zma)  LOC100785799 (gma)  LOC100798833 (gma)  LOC101257403 (sly)  LOC103633324 (zma)  LOC103641855 (zma)  LOC103642837 (zma)  LOC103642838 (zma)  LOC103836632 (bra)  LOC103843705 (bra) 
Subcellular
localization
wolf
nucl 7,  nucl_plas 4,  cyto 1  (predict for NP_563676.1)
Subcellular
localization
TargetP
other 8  (predict for NP_563676.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT1G03140 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.1 AT3G47610 transcription regulator/ zinc ion binding protein [detail] 823915
7.8 AT3G19910 RING/U-box superfamily protein [detail] 821529
7.4 AT2G46900 transcription factor-like protein [detail] 819303
6.3 TAF11 TBP-associated factor 11 [detail] 827775
Coexpressed
gene list		 [Coexpressed gene list for AT1G03140]
Gene expression
All samples [Expression pattern for all samples]
Link to other DBs
Entrez Gene ID 839567      
Refseq ID (protein) NP_563676.1 


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