[←][→] ath   At1g03360 Gene
functional annotation
Function   ribosomal RNA processing 4      
GO BP
GO:0000460 [list] [network] maturation of 5.8S rRNA  (2 genes)  IMP  
GO:0060149 [list] [network] negative regulation of post-transcriptional gene silencing  (8 genes)  IMP  
GO CC
GO:0005654 [list] [network] nucleoplasm  (253 genes)  IDA  
GO:0005730 [list] [network] nucleolus  (387 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  IDA  
GO MF
KEGG ath03018 [list] [network] RNA degradation (113 genes)
Protein NP_171835.1 
BLAST NP_171835.1 
Orthologous [Ortholog page] LOC4336421 (osa)  LOC7462802 (ppo)  LOC11418314 (mtr)  LOC100776358 (gma)  LOC101267058 (sly)  LOC103844513 (bra)  LOC123129525 (tae)  LOC123143954 (tae)  LOC123150044 (tae)  LOC123158903 (tae)  LOC123165156 (tae)  LOC123405160 (hvu)  LOC123410114 (hvu) 
Subcellular
localization
wolf
chlo 5,  nucl 2,  mito 2  (predict for NP_171835.1)
Subcellular
localization
TargetP
mito 8  (predict for NP_171835.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 2
ath03018 RNA degradation 2
Genes directly connected with RRP4 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
10.2 AT3G13230 RNA-binding KH domain-containing protein [detail] 820521
10.1 AT1G52930 Ribosomal RNA processing Brix domain protein [detail] 841726
10.0 RID2 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [detail] 835833
8.7 AT3G56570 SET domain-containing protein [detail] 824824
8.6 RRP41L 3'-5'-exoribonuclease family protein [detail] 828858
8.5 AT-IE histidine biosynthesis bifunctional protein (HISIE) [detail] 840076
7.5 AT1G62150 Mitochondrial transcription termination factor family protein [detail] 842511
Coexpressed
gene list		 [Coexpressed gene list for RRP4]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
264357_at
264357_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
264357_at
264357_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
264357_at
264357_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 839521      
Refseq ID (protein) NP_171835.1 


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