[←][→] ath   AT1G04860 Gene
functional annotation
Function   ubiquitin-specific protease 2  
GO BP
GO:0016579 [list] [network] protein deubiquitination  (48 genes)  IBA  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (436 genes)  TAS  
GO CC
GO:0000502 [list] [network] proteasome complex  (80 genes)  TAS  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0004843 [list] [network] thiol-dependent ubiquitin-specific protease activity  (42 genes)  IBA IMP  
GO:0004197 [list] [network] cysteine-type endopeptidase activity  (66 genes)  IBA  
GO:0008270 [list] [network] zinc ion binding  (554 genes)  IEA  
KEGG
Protein NP_563719.1 
BLAST NP_563719.1 
Orthologous [Ortholog page] UBP1 (ath)  LOC4347503 (osa)  LOC7461662 (ppo)  LOC7496628 (ppo)  LOC11435669 (mtr)  LOC100255551 (vvi)  LOC100776156 (gma)  LOC100780952 (gma)  LOC101245656 (sly)  LOC101264762 (sly)  LOC103647570 (zma)  LOC103836550 (bra)  LOC103843633 (bra)  LOC103867606 (bra) 
Subcellular
localization
wolf
nucl 9,  cysk 1,  golg_plas 1  (predict for NP_563719.1)
Subcellular
localization
TargetP
other 8  (predict for NP_563719.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with UBP2 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.9 ABCF4 general control non-repressible 4 [detail] 824619
7.5 AT1G22730 MA3 domain-containing protein [detail] 838879
7.1 AT4G24200 Transcription elongation factor (TFIIS) family protein [detail] 828521
4.6 AT5G50860 Protein kinase superfamily protein [detail] 835158
Coexpressed
gene list		 [Coexpressed gene list for UBP2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
261128_at
261128_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
261128_at
261128_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
261128_at
261128_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 839397      
Refseq ID (protein) NP_563719.1 


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