[←][→] ath   At1g04960 Gene
functional annotation
Function   golgin family A protein (DUF1664)    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0007033 [list] [network] vacuole organization  (45 genes)  IEA  
GO:0007034 [list] [network] vacuolar transport  (63 genes)  IEA  
GO:0046907 [list] [network] intracellular transport  (330 genes)  IEA  
GO:0008104 [list] [network] protein localization  (419 genes)  IEA  
GO:0070727 [list] [network] cellular macromolecule localization  (458 genes)  IEA  
GO:0048522 [list] [network] positive regulation of cellular process  (856 genes)  IEA  
GO:1901701 [list] [network] cellular response to oxygen-containing compound  (1115 genes)  IEA  
GO:0006952 [list] [network] defense response  (2370 genes)  IEA  
GO CC
GO:0005576 [list] [network] extracellular region  (3154 genes)  ISM  
GO MF
KEGG
Protein NP_001077461.1  NP_563723.1 
BLAST NP_001077461.1  NP_563723.1 
Orthologous [Ortholog page] BZIP109 (gma)  BZIP108 (gma)  AT2G02730 (ath)  AT1G27000 (ath)  LOC4337995 (osa)  LOC7455970 (ppo)  LOC7458276 (ppo)  LOC7471497 (ppo)  LOC7474230 (ppo)  LOC9271634 (osa)  LOC11419070 (mtr)  LOC11429061 (mtr)  LOC101248698 (sly)  LOC101265351 (sly)  LOC103827510 (bra)  LOC103835626 (bra)  LOC103839440 (bra)  LOC103840670 (bra)  LOC103844195 (bra)  LOC107276490 (osa)  LOC123040939 (tae)  LOC123057982 (tae)  LOC123065012 (tae)  LOC123074146 (tae)  LOC123104139 (tae)  LOC123112364 (tae)  LOC123115169 (tae)  LOC123121891 (tae)  LOC123180723 (tae)  LOC123399310 (hvu)  LOC123427139 (hvu)  LOC123441471 (hvu) 
Subcellular
localization
wolf
cyto 4,  nucl 4,  chlo 2,  cyto_pero 2,  cyto_E.R. 2,  cyto_plas 2  (predict for NP_001077461.1)
chlo 5,  vacu 2,  cyto 1,  extr 1,  E.R. 1,  pero 1,  cyto_pero 1,  cyto_E.R. 1  (predict for NP_563723.1)
Subcellular
localization
TargetP
scret 9  (predict for NP_001077461.1)
scret 5  (predict for NP_563723.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00020 Citrate cycle (TCA cycle) 4
ath01200 Carbon metabolism 4
ath04120 Ubiquitin mediated proteolysis 3
ath00630 Glyoxylate and dicarboxylate metabolism 2
ath01210 2-Oxocarboxylic acid metabolism 2
Genes directly connected with AT1G04960 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.8 AT1G27000 GRIP/coiled-coil protein, putative (DUF1664) [detail] 839590
7.3 UBC34 ubiquitin-conjugating enzyme 34 [detail] 838300
7.1 CHIP carboxyl terminus of HSC70-interacting protein [detail] 819925
Coexpressed
gene list		 [Coexpressed gene list for AT1G04960]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
261155_at
261155_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
261155_at
261155_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
261155_at
261155_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 839346      
Refseq ID (protein) NP_001077461.1 
NP_563723.1 


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