[←][→] ath   At1g04990 Gene
functional annotation
Function   Zinc finger C-x8-C-x5-C-x3-H type family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0009968 [list] [network] negative regulation of signal transduction  (123 genes)  IEA  
GO:0009723 [list] [network] response to ethylene  (241 genes)  IEA  
GO:0042546 [list] [network] cell wall biogenesis  (399 genes)  IEA  
GO:0071669 [list] [network] plant-type cell wall organization or biogenesis  (489 genes)  IEA  
GO:0009057 [list] [network] macromolecule catabolic process  (548 genes)  IEA  
GO:0009755 [list] [network] hormone-mediated signaling pathway  (904 genes)  IEA  
GO:0009414 [list] [network] response to water deprivation  (1006 genes)  IEA  
GO:0009737 [list] [network] response to abscisic acid  (1086 genes)  IEA  
GO:0044248 [list] [network] cellular catabolic process  (1086 genes)  IEA  
GO:0030154 [list] [network] cell differentiation  (1176 genes)  IEA  
GO:0007165 [list] [network] signal transduction  (2054 genes)  IEA  
GO:0044281 [list] [network] small molecule metabolic process  (2411 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0003729 [list] [network] mRNA binding  (1535 genes)  HDA IDA  
KEGG
Protein NP_001318923.1  NP_001323178.1  NP_001323179.1  NP_001323180.1  NP_563725.1  NP_973759.1 
BLAST NP_001318923.1  NP_001323178.1  NP_001323179.1  NP_001323180.1  NP_563725.1  NP_973759.1 
Orthologous [Ortholog page] ZFN2 (ath)  LOC7458282 (ppo)  LOC7468531 (ppo)  LOC11435155 (mtr)  LOC100792928 (gma)  LOC100812856 (gma)  LOC103844187 (bra)  LOC103857463 (bra)  LOC103865234 (bra)  LOC103867591 (bra) 
Subcellular
localization
wolf
nucl 6,  chlo 2,  extr 1  (predict for NP_001318923.1)
chlo 5,  nucl 2,  extr 1,  vacu 1  (predict for NP_001323178.1)
chlo 5,  nucl 2,  extr 1,  vacu 1  (predict for NP_001323179.1)
nucl 6,  chlo 2,  extr 1  (predict for NP_001323180.1)
nucl 6,  chlo 2,  extr 1  (predict for NP_563725.1)
nucl 6,  chlo 2,  extr 1  (predict for NP_973759.1)
Subcellular
localization
TargetP
other 5  (predict for NP_001318923.1)
scret 6  (predict for NP_001323178.1)
scret 6  (predict for NP_001323179.1)
other 5  (predict for NP_001323180.1)
other 5  (predict for NP_563725.1)
other 5  (predict for NP_973759.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04626 Plant-pathogen interaction 4
ath04070 Phosphatidylinositol signaling system 4
ath04016 MAPK signaling pathway - plant 3
ath00480 Glutathione metabolism 2
Genes directly connected with AT1G04990 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.7 ZFN2 zinc finger nuclease 2 [detail] 817855
5.5 UXS5 UDP-XYL synthase 5 [detail] 823794
5.1 GPX6 glutathione peroxidase 6 [detail] 826765
Coexpressed
gene list		 [Coexpressed gene list for AT1G04990]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
261125_at
261125_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
261125_at
261125_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
261125_at
261125_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 839351      
Refseq ID (protein) NP_001318923.1 
NP_001323178.1 
NP_001323179.1 
NP_001323180.1 
NP_563725.1 
NP_973759.1 


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