ATTED-II : GeneID search result

[←][→] ath AT1G05750 Gene

functional annotation

Function

Tetratricopeptide repeat (TPR)-like superfamily protein

GO BP

GO:0009451 [list] [network] RNA modification

(403 genes)

IBA IMP

GO CC

GO:0009507 [list] [network] chloroplast

(5095 genes)

IDA ISM

GO MF

GO:0005515 [list] [network] protein binding

(4605 genes)

IPI

KEGG

Protein

NP_001322717.1 NP_172066.3

BLAST

NP_001322717.1 NP_172066.3

Orthologous

[Ortholog page] LOC4330860 (osa) LOC7478495 (ppo) LOC11409652 (mtr) LOC100249599 (vvi) LOC100792726 (gma) LOC101256843 (sly) LOC103654223 (zma) LOC103836512 (bra) LOC112419507 (mtr) LOC112419508 (mtr)

Subcellular
localization
wolf

chlo 7, nucl 1, cyto 1, plas 1, extr 1, cyto_nucl 1, nucl_plas 1, cyto_plas 1	(predict for NP_001322717.1)
chlo 7, nucl 1, cyto 1, plas 1, extr 1, cyto_nucl 1, nucl_plas 1, cyto_plas 1	(predict for NP_172066.3)

Subcellular
localization
TargetP

chlo 7	(predict for NP_001322717.1)
chlo 7	(predict for NP_172066.3)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with PDE247 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
8.8	AT3G11460	Pentatricopeptide repeat (PPR) superfamily protein	[detail]	820319
8.3	nMAT1	Intron maturase, type II family protein	[detail]	839880
8.2	AT3G26540	Tetratricopeptide repeat (TPR)-like superfamily protein	[detail]	822262
6.7	AT2G41080	pentatricopeptide (PPR) repeat protein	[detail]	818707
6.0	RUS1	root UVB sensitive-like protein (Protein of unknown function, DUF647)	[detail]	823732

Coexpressed
gene list

[Coexpressed gene list for PDE247]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

261310_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

261310_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

261310_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	837083
Refseq ID (protein)	NP_001322717.1
Refseq ID (protein)	NP_172066.3

The preparation time of this page was 0.2 [sec].