[←][→] ath   At1g05750 Gene
functional annotation
Function   Tetratricopeptide repeat (TPR)-like superfamily protein      
GO BP
GO:0009451 [list] [network] RNA modification  (197 genes)  IMP  
GO CC
GO:0009507 [list] [network] chloroplast  (5004 genes)  IDA ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_001322717.1  NP_172066.3 
BLAST NP_001322717.1  NP_172066.3 
Orthologous [Ortholog page] LOC4330860 (osa)  LOC7478495 (ppo)  LOC11409652 (mtr)  LOC100792726 (gma)  LOC101256843 (sly)  LOC103836512 (bra)  LOC112419508 (mtr)  LOC123128542 (tae)  LOC123129701 (tae)  LOC123138409 (tae)  LOC123138412 (tae)  LOC123145663 (tae)  LOC123145668 (tae)  LOC123401892 (hvu) 
Subcellular
localization
wolf
chlo 7,  nucl 1,  cyto 1,  plas 1,  extr 1,  cyto_nucl 1,  nucl_plas 1,  cyto_plas 1  (predict for NP_001322717.1)
chlo 7,  nucl 1,  cyto 1,  plas 1,  extr 1,  cyto_nucl 1,  nucl_plas 1,  cyto_plas 1  (predict for NP_172066.3)
Subcellular
localization
TargetP
chlo 7  (predict for NP_001322717.1)
chlo 7  (predict for NP_172066.3)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with PDE247 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
9.4 AT3G11460 Pentatricopeptide repeat (PPR) superfamily protein [detail] 820319
8.3 AT5G16420 Pentatricopeptide repeat (PPR-like) superfamily protein [detail] 831503
8.0 nMAT1 Intron maturase, type II family protein [detail] 839880
6.9 AT2G41080 pentatricopeptide (PPR) repeat protein [detail] 818707
Coexpressed
gene list		 [Coexpressed gene list for PDE247]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
261310_at
261310_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
261310_at
261310_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
261310_at
261310_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 837083      
Refseq ID (protein) NP_001322717.1 
NP_172066.3 


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