ATTED-II : GeneID search result

[←][→] ath AT1G05880 Gene

functional annotation

Function

RING/U-box superfamily protein

GO BP

GO:0032436 [list] [network] positive regulation of proteasomal ubiquitin-dependent protein catabolic process	(38 genes)	IBA
GO:0000209 [list] [network] protein polyubiquitination	(71 genes)	IBA
GO:0010224 [list] [network] response to UV-B	(71 genes)	IEP
GO:0071456 [list] [network] cellular response to hypoxia	(238 genes)	IEP
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process	(436 genes)	IBA

GO CC

GO:0000151 [list] [network] ubiquitin ligase complex	(277 genes)	IBA
GO:0005634 [list] [network] nucleus	(10793 genes)	ISM
GO:0005737 [list] [network] cytoplasm	(14855 genes)	IBA

GO MF

GO:0031624 [list] [network] ubiquitin conjugating enzyme binding	(43 genes)	IBA
GO:0061630 [list] [network] ubiquitin protein ligase activity	(204 genes)	IBA
GO:0046872 [list] [network] metal ion binding	(3180 genes)	IEA

KEGG

Protein

NP_001184919.1 NP_001322817.1 NP_172079.2

BLAST

NP_001184919.1 NP_001322817.1 NP_172079.2

Orthologous

[Ortholog page] ARI7 (ath) ARI10 (ath) ARI9 (ath) ARI11 (ath) ARI5 (ath) ARI8 (ath) LOC4336253 (osa) LOC7491767 (ppo) LOC11411243 (mtr) LOC11426565 (mtr) LOC11431423 (mtr) LOC25492643 (mtr) LOC100257000 (vvi) LOC100262873 (vvi) LOC100273409 (zma) LOC100383448 (zma) ARI1 (gma) ARI3 (gma) ARI2 (gma) LOC100810427 (gma) LOC101248534 (sly) LOC101250704 (sly) LOC103844087 (bra) LOC103852234 (bra) LOC103857376 (bra) LOC103857400 (bra) LOC103865131 (bra) LOC103865150 (bra) LOC103865152 (bra) LOC103867699 (bra)

Subcellular
localization
wolf

nucl 5, cyto 2, chlo 1, vacu 1, cysk 1, chlo_mito 1	(predict for NP_001184919.1)
nucl 5, cyto 3, cysk_nucl 3	(predict for NP_001322817.1)
nucl 5, cyto 2, chlo 1, vacu 1, cysk 1, chlo_mito 1	(predict for NP_172079.2)

Subcellular
localization
TargetP

other 9	(predict for NP_001184919.1)
other 9	(predict for NP_001322817.1)
other 9	(predict for NP_172079.2)

Gene coexpression

Network^*for
coexpressed
genes

Coexpressed
gene list

[Coexpressed gene list for ARI12]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

261249_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

261249_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

261249_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	837098
Refseq ID (protein)	NP_001184919.1
	NP_001322817.1
	NP_172079.2

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