[←][→] ath   AT1G06430 Gene
functional annotation
Function   FTSH protease 8  
GO BP
GO:0010304 [list] [network] PSII associated light-harvesting complex II catabolic process  (8 genes)  IBA TAS  
GO:0010205 [list] [network] photoinhibition  (13 genes)  IBA  
GO:0010206 [list] [network] photosystem II repair  (14 genes)  IBA  
GO:0010027 [list] [network] thylakoid membrane organization  (49 genes)  IBA  
GO:0006508 [list] [network] proteolysis  (901 genes)  IBA  
GO:0007275 [list] [network] multicellular organism development  (2714 genes)  IEA  
GO CC
GO:0009535 [list] [network] chloroplast thylakoid membrane  (373 genes)  IBA IDA  
GO:0009534 [list] [network] chloroplast thylakoid  (474 genes)  IDA  
GO:0009579 [list] [network] thylakoid  (543 genes)  IDA  
GO:0009941 [list] [network] chloroplast envelope  (666 genes)  IBA IDA  
GO:0005576 [list] [network] extracellular region  (3363 genes)  HDA  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  IDA ISM  
GO MF
GO:0004176 [list] [network] ATP-dependent peptidase activity  (30 genes)  IBA ISS  
GO:0004222 [list] [network] metalloendopeptidase activity  (48 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (554 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2003 genes)  IEA  
KEGG
Protein NP_001321589.1  NP_001321590.1  NP_563766.3 
BLAST NP_001321589.1  NP_001321590.1  NP_563766.3 
Orthologous [Ortholog page] VAR2 (ath)  LOC4341796 (osa)  LOC7457995 (ppo)  LOC7489894 (ppo)  LOC25488224 (mtr)  LOC25493413 (mtr)  LOC100147734 (zma)  LOC100147735 (zma)  LOC100250511 (vvi)  FTSH9 (gma)  LOC100798355 (gma)  LOC100800550 (gma)  LOC100816354 (gma)  LOC101266739 (sly)  LOC103836478 (bra)  LOC103844041 (bra)  LOC103867923 (bra) 
Subcellular
localization
wolf
chlo 9,  E.R. 1  (predict for NP_001321589.1)
chlo 9,  E.R. 1  (predict for NP_001321590.1)
chlo 9,  E.R. 1  (predict for NP_563766.3)
Subcellular
localization
TargetP
chlo 4,  mito 4  (predict for NP_001321589.1)
chlo 4,  mito 4  (predict for NP_001321590.1)
chlo 4,  mito 4  (predict for NP_563766.3)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with FTSH8 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
12.8 FTSH1 FTSH protease 1 [detail] 841447
10.8 AT3G07700 Protein kinase superfamily protein [detail] 819961
10.4 AT3G24190 Protein kinase superfamily protein [detail] 822005
9.8 VAR1 FtsH extracellular protease family [detail] 834232
8.1 SQE3 squalene epoxidase 3 [detail] 829932
8.0 VTE1 tocopherol cyclase, chloroplast / vitamin E deficient 1 (VTE1) / sucrose export defective 1 (SXD1) [detail] 829413
7.4 AT4G17840 CAAX protease self-immunity protein [detail] 827507
7.1 CCD1 carotenoid cleavage dioxygenase 1 [detail] 825527
7.1 AT2G41040 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [detail] 818703
6.8 AT3G17800 alanine-tRNA ligase, putative (DUF760) [detail] 821048
6.3 RbcX2 Chaperonin-like RbcX protein [detail] 832106
Coexpressed
gene list		 [Coexpressed gene list for FTSH8]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
262626_at
262626_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
262626_at
262626_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
262626_at
262626_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 837154      
Refseq ID (protein) NP_001321589.1 
NP_001321590.1 
NP_563766.3 


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