[←][→] ath   AT1G06680 Gene
functional annotation
Function   photosystem II subunit P-1  
GO BP
GO:0019684 [list] [network] photosynthesis, light reaction  (109 genes)  TAS  
GO:0042742 [list] [network] defense response to bacterium  (399 genes)  IEP  
GO CC
GO:0009654 [list] [network] photosystem II oxygen evolving complex  (21 genes)  IEA  
GO:0009543 [list] [network] chloroplast thylakoid lumen  (59 genes)  IDA IEA  
GO:0019898 [list] [network] extrinsic component of membrane  (62 genes)  TAS  
GO:0031977 [list] [network] thylakoid lumen  (72 genes)  IDA  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (373 genes)  IDA  
GO:0048046 [list] [network] apoplast  (443 genes)  IDA  
GO:0009534 [list] [network] chloroplast thylakoid  (474 genes)  IDA  
GO:0009579 [list] [network] thylakoid  (543 genes)  IDA  
GO:0009941 [list] [network] chloroplast envelope  (666 genes)  IDA  
GO:0009570 [list] [network] chloroplast stroma  (750 genes)  IDA  
GO:0005576 [list] [network] extracellular region  (3363 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  HDA IDA ISM  
GO MF
GO:0008266 [list] [network] poly(U) RNA binding  (28 genes)  IDA  
GO:0005509 [list] [network] calcium ion binding  (242 genes)  IEA  
KEGG ath00195 [list] [network] Photosynthesis (76 genes)
Protein NP_001117239.1  NP_172153.1 
BLAST NP_001117239.1  NP_172153.1 
Orthologous [Ortholog page] PSBP (sly)  LOC4342370 (osa)  LOC7464819 (ppo)  LOC7480710 (ppo)  LOC11429945 (mtr)  LOC25490561 (mtr)  PSBP1 (vvi)  LOC100781848 (gma)  LOC100784806 (gma)  LOC100802315 (gma)  LOC100813388 (gma)  LOC103836470 (bra)  LOC103843499 (bra)  LOC103844017 (bra)  LOC103867933 (bra)  LOC107648855 (zma) 
Subcellular
localization
wolf
chlo 4,  extr 2,  mito 1,  cyto 1,  vacu 1,  E.R. 1,  cyto_mito 1,  E.R._vacu 1,  mito_plas 1,  cyto_E.R. 1  (predict for NP_001117239.1)
chlo 7,  mito 3  (predict for NP_172153.1)
Subcellular
localization
TargetP
scret 6,  chlo 3  (predict for NP_001117239.1)
chlo 8  (predict for NP_172153.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 10
ath00196 Photosynthesis - antenna proteins 6
Genes directly connected with PSBP-1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
20.6 PSBO1 PS II oxygen-evolving complex 1 [detail] 836789
19.9 LHCB5 light harvesting complex of photosystem II 5 [detail] 826626
18.3 PSAK photosystem I subunit K [detail] 839918
17.9 PSAF photosystem I subunit F [detail] 840021
16.4 PSBQ-2 photosystem II subunit Q-2 [detail] 825866
16.1 DRT112 Cupredoxin superfamily protein [detail] 838622
14.1 PSBR photosystem II subunit R [detail] 844245
14.0 PSBQA photosystem II subunit QA [detail] 827877
13.2 TLP18.3 thylakoid lumen 18.3 kDa protein [detail] 841919
12.2 PSI-P photosystem I P subunit [detail] 819295
10.4 APE2 Glucose-6-phosphate/phosphate translocator-like protein [detail] 834652
10.1 PTAC16 plastid transcriptionally active 16 [detail] 823831
9.0 TROL thylakoid rhodanese-like protein [detail] 827921
Coexpressed
gene list		 [Coexpressed gene list for PSBP-1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
262632_at
262632_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
262632_at
262632_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
262632_at
262632_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 837178      
Refseq ID (protein) NP_001117239.1 
NP_172153.1 


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