ATTED-II : GeneID search result

[←][→] ath At1g07410 Gene

functional annotation

Function

RAB GTPase homolog A2B

GO BP

GO:0042546 [list] [network] cell wall biogenesis

(399 genes)

IMP

GO CC

GO:0009504 [list] [network] cell plate	(42 genes)	IDA
GO:0005768 [list] [network] endosome	(350 genes)	IDA
GO:0005886 [list] [network] plasma membrane	(2529 genes)	HDA

GO MF

KEGG

Protein

NP_172221.1

BLAST

NP_172221.1

Orthologous

[Ortholog page] RABA2c (ath) RABA2D (ath) LOC4324856 (osa) LOC4334619 (osa) LOC4338288 (osa) LOC7487989 (ppo) LOC7489179 (ppo) LOC7490362 (ppo) LOC11408299 (mtr) LOC18106002 (ppo) LOC25492545 (mtr) LOC100799021 (gma) LOC100799521 (gma) LOC100799595 (gma) LOC100813743 (gma) LOC100816268 (gma) LOC101251092 (sly) LOC101258042 (sly) LOC101260347 (sly) LOC101268402 (sly) LOC103836445 (bra) LOC103843460 (bra) LOC103843948 (bra) LOC103845344 (bra) LOC103851600 (bra) LOC103873290 (bra) LOC123062595 (tae) LOC123071414 (tae) LOC123079752 (tae) LOC123105710 (tae) LOC123114039 (tae) LOC123117625 (tae) LOC123123532 (tae) LOC123428721 (hvu) LOC123444895 (hvu) LOC123453090 (hvu)

Subcellular
localization
wolf

nucl 4, chlo 3, cysk_nucl 3, cyto 1, plas 1, extr 1, cyto_plas 1

(predict for NP_172221.1)

Subcellular
localization
TargetP

other 7, scret 3

(predict for NP_172221.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with RABA2b on the network
coex z^*	Locus	Function^*	CoexViewer	Entrez Gene ID^*
5.5	AT3G03320	RNA-binding ASCH domain protein	[detail]	821284
5.3	PDX1.2	pyridoxine biosynthesis 1.2	[detail]	820850
5.1	AT5G27490	Integral membrane Yip1 family protein	[detail]	832808

Coexpressed
gene list

[Coexpressed gene list for RABA2b]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

261069_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

261069_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

261069_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	837253
Refseq ID (protein)	NP_172221.1

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