[←][→] ath   At1g08490 Gene
functional annotation
Function   chloroplastic NIFS-like cysteine desulfurase    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0018283 [list] [network] iron incorporation into metallo-sulfur cluster  (1 genes)  IDA  
GO:0010269 [list] [network] response to selenium ion  (3 genes)  IMP  
GO:0001887 [list] [network] selenium compound metabolic process  (4 genes)  IDA  
GO:0006534 [list] [network] cysteine metabolic process  (18 genes)  IEA  
GO:0006790 [list] [network] sulfur compound metabolic process  (420 genes)  IDA  
GO CC
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA IDA ISM  
GO MF
GO:0009000 [list] [network] selenocysteine lyase activity  (2 genes)  IDA  
GO:0031071 [list] [network] cysteine desulfurase activity  (2 genes)  IDA  
GO:0030170 [list] [network] pyridoxal phosphate binding  (26 genes)  IEA  
KEGG ath00450 [list] [network] Selenocompound metabolism (18 genes)
Protein NP_172325.2 
BLAST NP_172325.2 
Orthologous [Ortholog page] LOC4351999 (osa)  LOC7454888 (ppo)  LOC11442477 (mtr)  LOC100500160 (gma)  LOC100799615 (gma)  LOC101250891 (sly)  LOC103871590 (bra)  LOC123091543 (tae)  LOC123096499 (tae)  LOC123448081 (hvu) 
Subcellular
localization
wolf
chlo 9  (predict for NP_172325.2)
Subcellular
localization
TargetP
chlo 9  (predict for NP_172325.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 4
ath00450 Selenocompound metabolism 2
ath01240 Biosynthesis of cofactors 2
Genes directly connected with CPNIFS on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
6.9 OVA5 Lysyl-tRNA synthetase, class II [detail] 820551
6.5 ABCB29 ABC2 homolog 12 [detail] 830269
6.4 AT2G43235 phosphoribosylformylglycinamidine synthase [detail] 5007958
6.4 AT5G60750 CAAX amino terminal protease family protein [detail] 836196
6.4 AT2G32040 Major facilitator superfamily protein [detail] 817764
6.1 TH1 thiamine biosynthesis protein [detail] 838901
Coexpressed
gene list		 [Coexpressed gene list for CPNIFS]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
261744_at
261744_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
261744_at
261744_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
261744_at
261744_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 837370      
Refseq ID (protein) NP_172325.2 


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