[←][→] ath   AT1G09230 Gene
functional annotation
Function   RNA-binding (RRM/RBD/RNP motifs) family protein  
GO BP
GO:0010229 [list] [network] inflorescence development  (24 genes)  IMP  
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (172 genes)  IBA IDA IMP  
GO CC
GO:0005689 [list] [network] U12-type spliceosomal complex  (18 genes)  IBA NAS  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO MF
GO:0030626 [list] [network] U12 snRNA binding  (1 genes)  IBA IDA  
GO:0097157 [list] [network] pre-mRNA intronic binding  (4 genes)  IBA IDA  
KEGG
Protein NP_001320300.1  NP_001320301.1  NP_172394.1 
BLAST NP_001320300.1  NP_001320301.1  NP_172394.1 
Orthologous [Ortholog page] LOC4332713 (osa)  LOC11435764 (mtr)  LOC100193767 (zma)  LOC100243611 (vvi)  LOC100247346 (vvi)  LOC100814307 (gma)  LOC100818499 (gma)  LOC101247760 (sly)  LOC103871650 (bra) 
Subcellular
localization
wolf
nucl 5,  chlo 4,  cyto 1,  plas 1,  cyto_plas 1  (predict for NP_001320300.1)
nucl 6,  chlo 4  (predict for NP_001320301.1)
nucl 4,  chlo 4,  cyto 1  (predict for NP_172394.1)
Subcellular
localization
TargetP
mito 6  (predict for NP_001320300.1)
other 8  (predict for NP_001320301.1)
other 8  (predict for NP_172394.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT1G09230 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.0 AT1G75340 Zinc finger C-x8-C-x5-C-x3-H type family protein [detail] 843870
5.7 FER1 ferretin 1 [detail] 831720
5.3 AT5G59400 PGR5-like A protein [detail] 836059
Coexpressed
gene list		 [Coexpressed gene list for AT1G09230]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
264257_at
264257_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
264257_at
264257_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
264257_at
264257_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 837443      
Refseq ID (protein) NP_001320300.1 
NP_001320301.1 
NP_172394.1 


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