ATTED-II : GeneID search result

[←][→] ath AT1G09840 Gene

functional annotation

Function

shaggy-like protein kinase 41

GO BP

GO:0018107 [list] [network] peptidyl-threonine phosphorylation	(16 genes)	IBA
GO:0018105 [list] [network] peptidyl-serine phosphorylation	(84 genes)	IBA
GO:0007165 [list] [network] signal transduction	(1575 genes)	IBA

GO CC

GO:0005829 [list] [network] cytosol	(3506 genes)	IBA
GO:0005886 [list] [network] plasma membrane	(3771 genes)	IDA
GO:0005739 [list] [network] mitochondrion	(4405 genes)	ISM
GO:0005634 [list] [network] nucleus	(10793 genes)	ISM

GO MF

GO:0004674 [list] [network] protein serine/threonine kinase activity	(801 genes)	IBA
GO:0005524 [list] [network] ATP binding	(2003 genes)	IEA

KEGG

Protein

NP_001031013.1 NP_001077498.1 NP_001077499.1 NP_001318967.1 NP_001322592.1 NP_001322593.1 NP_001322594.1 NP_001322595.1 NP_172455.1 NP_849627.1 NP_973801.1

BLAST

NP_001031013.1 NP_001077498.1 NP_001077499.1 NP_001318967.1 NP_001322592.1 NP_001322593.1 NP_001322594.1 NP_001322595.1 NP_172455.1 NP_849627.1 NP_973801.1

Orthologous

[Ortholog page] LOC542518 (zma) SK42 (ath) LOC4334738 (osa) LOC11430329 (mtr) LOC100252299 (vvi) LOC100799387 (gma) LOC100820098 (gma) LOC101265073 (sly) LOC103836306 (bra) LOC103871763 (bra)

Subcellular
localization
wolf

mito 3, nucl 3, cyto_mito 2, chlo 1, cyto 1, plas 1, cysk 1, cysk_plas 1, cyto_plas 1	(predict for NP_001031013.1)
mito 3, nucl 3, cyto_mito 2, chlo 1, cyto 1, plas 1, cysk 1, cysk_plas 1, cyto_plas 1	(predict for NP_001077498.1)
mito 3, nucl 3, cyto_mito 2, chlo 1, cyto 1, plas 1, cysk 1, cysk_plas 1, cyto_plas 1	(predict for NP_001077499.1)
mito 3, nucl 3, cyto_mito 2, chlo 1, cyto 1, plas 1, cysk 1, cysk_plas 1, cyto_plas 1	(predict for NP_001318967.1)
mito 3, nucl 3, cyto_mito 2, chlo 1, cyto 1, plas 1, cysk 1, cysk_plas 1, cyto_plas 1	(predict for NP_001322592.1)
mito 3, nucl 3, cyto_mito 2, chlo 1, cyto 1, plas 1, cysk 1, cysk_plas 1, cyto_plas 1	(predict for NP_001322593.1)
cyto 3, mito 2, chlo 2, cyto_mito 1, cyto_plas 1	(predict for NP_001322594.1)
mito 3, nucl 3, cyto_mito 2, chlo 1, cyto 1, plas 1, cysk 1, cysk_plas 1, cyto_plas 1	(predict for NP_001322595.1)
mito 3, nucl 3, cyto_mito 2, chlo 1, cyto 1, plas 1, cysk 1, cysk_plas 1, cyto_plas 1	(predict for NP_172455.1)
mito 3, nucl 3, cyto_mito 2, chlo 1, cyto 1, plas 1, cysk 1, cysk_plas 1, cyto_plas 1	(predict for NP_849627.1)
mito 3, nucl 3, cyto_mito 2, chlo 1, cyto 1, plas 1, cysk 1, cysk_plas 1, cyto_plas 1	(predict for NP_973801.1)

Subcellular
localization
TargetP

chlo 5	(predict for NP_001031013.1)
chlo 5	(predict for NP_001077498.1)
chlo 5	(predict for NP_001077499.1)
chlo 5	(predict for NP_001318967.1)
chlo 5	(predict for NP_001322592.1)
chlo 5	(predict for NP_001322593.1)
other 6	(predict for NP_001322594.1)
chlo 5	(predict for NP_001322595.1)
chlo 5	(predict for NP_172455.1)
chlo 5	(predict for NP_849627.1)
chlo 5	(predict for NP_973801.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with SK41 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
5.8	SK42	shaggy-like kinase 42	[detail]	842162
5.7	AT4G19110	Protein kinase superfamily protein	[detail]	827649
5.5	FEI1	Leucine-rich repeat protein kinase family protein	[detail]	840032

Coexpressed
gene list

[Coexpressed gene list for SK41]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

264686_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

264686_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

264686_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	837516
Refseq ID (protein)	NP_001031013.1
	NP_001077498.1
	NP_001077499.1
	NP_001318967.1
	NP_001322592.1
	NP_001322593.1
	NP_001322594.1
	NP_001322595.1
	NP_172455.1
	NP_849627.1
	NP_973801.1

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