[←][→] ath   AT1G10320 Gene
functional annotation
Function   Zinc finger C-x8-C-x5-C-x3-H type family protein  
GO BP
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (172 genes)  IBA  
GO CC
GO:0089701 [list] [network] U2AF  (6 genes)  IBA  
GO:0005681 [list] [network] spliceosomal complex  (142 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0030628 [list] [network] pre-mRNA 3'-splice site binding  (9 genes)  IBA  
GO:0003677 [list] [network] DNA binding  (2280 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG
Protein NP_001323006.1  NP_172503.1 
BLAST NP_001323006.1  NP_172503.1 
Orthologous [Ortholog page] LOC4329674 (osa)  LOC11421150 (mtr)  LOC100247160 (vvi)  LOC100789091 (gma)  LOC100794145 (gma)  LOC100857066 (zma)  LOC101257606 (sly)  LOC103868103 (bra) 
Subcellular
localization
wolf
nucl 9  (predict for NP_001323006.1)
nucl 9  (predict for NP_172503.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001323006.1)
other 9  (predict for NP_172503.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
Genes directly connected with AT1G10320 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.8 PRP40B pre-mRNA-processing protein 40B [detail] 821504
9.4 PRP40A pre-mRNA-processing protein 40A [detail] 841057
8.4 PRHA pathogenesis related homeodomain protein A [detail] 829117
7.5 UVH3 5'-3' exonuclease family protein [detail] 822427
Coexpressed
gene list		 [Coexpressed gene list for AT1G10320]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
264454_at
264454_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
264454_at
264454_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
264454_at
264454_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 837571      
Refseq ID (protein) NP_001323006.1 
NP_172503.1 


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