[][] ath   AT1G10580 Gene
functional annotation
Function   Transducin/WD40 repeat-like superfamily protein
GO BP
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (172 genes)  IEA  
GO CC
GO:0071013 [list] [network] catalytic step 2 spliceosome  (48 genes)  IEA  
GO:0080008 [list] [network] Cul4-RING E3 ubiquitin ligase complex  (130 genes)  ISS  
GO:0005576 [list] [network] extracellular region  (3363 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
KEGG ath03040 [list] [network] Spliceosome (192 genes)
Protein NP_172528.2 
BLAST NP_172528.2 
Orthologous [Ortholog page] LOC4333045 (osa)LOC7494756 (ppo)LOC11423131 (mtr)LOC25493639 (mtr)LOC100260455 (vvi)LOC100285823 (zma)LOC100778138 (gma)LOC100816419 (gma)LOC101258325 (sly)LOC103636014 (zma)LOC103871838 (bra)
Subcellular
localization
wolf
nucl 9  (predict for NP_172528.2)
Subcellular
localization
TargetP
other 7,  chlo 3  (predict for NP_172528.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
Genes directly connected with AT1G10580 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
8.4 AT2G33730 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 817938
7.7 SMU2 RED family protein [detail] 817187
7.6 AT4G38710 glycine-rich protein [detail] 830027
Coexpressed
gene list
[Coexpressed gene list for AT1G10580]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
263261_at
263261_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
263261_at
263261_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
263261_at
263261_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 837599    
Refseq ID (protein) NP_172528.2 


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