[←][→] ath   At1g10640 Gene
functional annotation
Function   Pectin lyase-like superfamily protein      
GO BP
GO:0007389 [list] [network] pattern specification process  (295 genes)  IEA  
GO:0005975 [list] [network] carbohydrate metabolic process  (844 genes)  IEA  
GO:1905392 [list] [network] plant organ morphogenesis  (906 genes)  IEA  
GO:0009892 [list] [network] negative regulation of metabolic process  (1067 genes)  IEA  
GO:0030154 [list] [network] cell differentiation  (1176 genes)  IEA  
GO:0048364 [list] [network] root development  (1192 genes)  IEA  
GO:0006952 [list] [network] defense response  (2370 genes)  IEA  
GO CC
GO:0005576 [list] [network] extracellular region  (3154 genes)  ISM  
GO MF
GO:0004650 [list] [network] polygalacturonase activity  (68 genes)  IEA  
KEGG
Protein NP_563875.6 
BLAST NP_563875.6 
Orthologous [Ortholog page] LOC547542 (gma)  LOC547543 (gma)  LOC732602 (gma)  AT5G14650 (ath)  AT1G60590 (ath)  LOC4326573 (osa)  LOC4339708 (osa)  LOC7469060 (ppo)  LOC7492392 (ppo)  LOC7496835 (ppo)  LOC11407103 (mtr)  LOC11423776 (mtr)  LOC25501370 (mtr)  LOC100783813 (gma)  LOC101246713 (sly)  LOC101253391 (sly)  LOC103838503 (bra)  LOC103843286 (bra)  LOC103846471 (bra)  LOC103868082 (bra)  LOC103871846 (bra)  LOC107276443 (osa)  LOC123061559 (tae)  LOC123070193 (tae)  LOC123183244 (tae)  LOC123443940 (hvu)  LOC123451668 (hvu) 
Subcellular
localization
wolf
chlo 7,  extr 2  (predict for NP_563875.6)
Subcellular
localization
TargetP
mito 3,  scret 3  (predict for NP_563875.6)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00040 Pentose and glucuronate interconversions 2
Genes directly connected with AT1G10640 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
13.4 AT1G60590 Pectin lyase-like superfamily protein [detail] 842353
8.6 AT1G48100 Pectin lyase-like superfamily protein [detail] 841228
7.7 AT5G13140 Pollen Ole e 1 allergen and extensin family protein [detail] 831153
6.4 AT1G67750 Pectate lyase family protein [detail] 843100
5.9 AT1G65900 plant/protein [detail] 842902
5.7 CYP96A12 cytochrome P450, family 96, subfamily A, polypeptide 12 [detail] 830105
5.6 GH9B18 glycosyl hydrolase 9B18 [detail] 830056
5.4 ABCI16 uncharacterized protein [detail] 818307
5.1 AT4G29240 Leucine-rich repeat (LRR) family protein [detail] 829045
4.9 AT4G09500 UDP-Glycosyltransferase superfamily protein [detail] 826534
Coexpressed
gene list		 [Coexpressed gene list for AT1G10640]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
261834_at
261834_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
261834_at
261834_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
261834_at
261834_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 837607      
Refseq ID (protein) NP_563875.6 


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